Protein–RNA interactions for Protein: Q9CUN6

Smurf1, E3 ubiquitin-protein ligase SMURF1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1Q9CUN6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smurf1Q9CUN6 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smurf1Q9CUN6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smurf1Q9CUN6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smurf1Q9CUN6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.4■□□□□ 0.54
Smurf1Q9CUN6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.4■□□□□ 0.54
Smurf1Q9CUN6 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smurf1Q9CUN6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smurf1Q9CUN6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smurf1Q9CUN6 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smurf1Q9CUN6 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smurf1Q9CUN6 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
Smurf1Q9CUN6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.39■□□□□ 0.53
Smurf1Q9CUN6 Cap2-205ENSMUST00000225824 1634 ntBASIC18.39■□□□□ 0.53
Smurf1Q9CUN6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smurf1Q9CUN6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smurf1Q9CUN6 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smurf1Q9CUN6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smurf1Q9CUN6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Smurf1Q9CUN6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smurf1Q9CUN6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.39■□□□□ 0.53
Smurf1Q9CUN6 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Smurf1Q9CUN6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smurf1Q9CUN6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smurf1Q9CUN6 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smurf1Q9CUN6 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smurf1Q9CUN6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.38■□□□□ 0.53
Smurf1Q9CUN6 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smurf1Q9CUN6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smurf1Q9CUN6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smurf1Q9CUN6 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smurf1Q9CUN6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smurf1Q9CUN6 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Smurf1Q9CUN6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smurf1Q9CUN6 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smurf1Q9CUN6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.38■□□□□ 0.53
Smurf1Q9CUN6 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smurf1Q9CUN6 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Smurf1Q9CUN6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smurf1Q9CUN6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smurf1Q9CUN6 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Smurf1Q9CUN6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smurf1Q9CUN6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smurf1Q9CUN6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Smurf1Q9CUN6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Smurf1Q9CUN6 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.36■□□□□ 0.53
Smurf1Q9CUN6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smurf1Q9CUN6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smurf1Q9CUN6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smurf1Q9CUN6 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smurf1Q9CUN6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Smurf1Q9CUN6 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.35■□□□□ 0.53
Smurf1Q9CUN6 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smurf1Q9CUN6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smurf1Q9CUN6 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smurf1Q9CUN6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smurf1Q9CUN6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.34■□□□□ 0.53
Smurf1Q9CUN6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.34■□□□□ 0.53
Smurf1Q9CUN6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smurf1Q9CUN6 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Smurf1Q9CUN6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Smurf1Q9CUN6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smurf1Q9CUN6 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smurf1Q9CUN6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smurf1Q9CUN6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smurf1Q9CUN6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.33■□□□□ 0.53
Smurf1Q9CUN6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.33■□□□□ 0.53
Smurf1Q9CUN6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Smurf1Q9CUN6 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smurf1Q9CUN6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.33■□□□□ 0.52
Smurf1Q9CUN6 Gm12366-201ENSMUST00000121722 873 ntBASIC18.33■□□□□ 0.52
Smurf1Q9CUN6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.33■□□□□ 0.52
Smurf1Q9CUN6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.33■□□□□ 0.52
Smurf1Q9CUN6 Gm5786-201ENSMUST00000085368 882 ntBASIC18.33■□□□□ 0.52
Smurf1Q9CUN6 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smurf1Q9CUN6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smurf1Q9CUN6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Smurf1Q9CUN6 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smurf1Q9CUN6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smurf1Q9CUN6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smurf1Q9CUN6 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smurf1Q9CUN6 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.33■□□□□ 0.52
Smurf1Q9CUN6 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Smurf1Q9CUN6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Smurf1Q9CUN6 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.33■□□□□ 0.52
Smurf1Q9CUN6 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Smurf1Q9CUN6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smurf1Q9CUN6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.32■□□□□ 0.52
Smurf1Q9CUN6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smurf1Q9CUN6 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smurf1Q9CUN6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Smurf1Q9CUN6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smurf1Q9CUN6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.31■□□□□ 0.52
Smurf1Q9CUN6 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smurf1Q9CUN6 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smurf1Q9CUN6 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smurf1Q9CUN6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smurf1Q9CUN6 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.31■□□□□ 0.52
Smurf1Q9CUN6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.31■□□□□ 0.52
Smurf1Q9CUN6 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms