Protein–RNA interactions for Protein: Q9CRA7

Atp5s, ATP synthase subunit s, mitochondrial, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp5sQ9CRA7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atp5sQ9CRA7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atp5sQ9CRA7 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atp5sQ9CRA7 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atp5sQ9CRA7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atp5sQ9CRA7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atp5sQ9CRA7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atp5sQ9CRA7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atp5sQ9CRA7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Atp5sQ9CRA7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.1■□□□□ 0.33
Atp5sQ9CRA7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Atp5sQ9CRA7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Atp5sQ9CRA7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atp5sQ9CRA7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.1■□□□□ 0.33
Atp5sQ9CRA7 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.1■□□□□ 0.33
Atp5sQ9CRA7 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.1■□□□□ 0.33
Atp5sQ9CRA7 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.1■□□□□ 0.33
Atp5sQ9CRA7 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.1■□□□□ 0.33
Atp5sQ9CRA7 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atp5sQ9CRA7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.1■□□□□ 0.33
Atp5sQ9CRA7 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atp5sQ9CRA7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atp5sQ9CRA7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atp5sQ9CRA7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atp5sQ9CRA7 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atp5sQ9CRA7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atp5sQ9CRA7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atp5sQ9CRA7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atp5sQ9CRA7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atp5sQ9CRA7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.09■□□□□ 0.33
Atp5sQ9CRA7 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atp5sQ9CRA7 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atp5sQ9CRA7 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atp5sQ9CRA7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Atp5sQ9CRA7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atp5sQ9CRA7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atp5sQ9CRA7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Atp5sQ9CRA7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atp5sQ9CRA7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Atp5sQ9CRA7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.08■□□□□ 0.32
Atp5sQ9CRA7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Atp5sQ9CRA7 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.08■□□□□ 0.32
Atp5sQ9CRA7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atp5sQ9CRA7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atp5sQ9CRA7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.08■□□□□ 0.32
Atp5sQ9CRA7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atp5sQ9CRA7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Atp5sQ9CRA7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atp5sQ9CRA7 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Atp5sQ9CRA7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atp5sQ9CRA7 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atp5sQ9CRA7 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atp5sQ9CRA7 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atp5sQ9CRA7 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atp5sQ9CRA7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atp5sQ9CRA7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Atp5sQ9CRA7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.06■□□□□ 0.32
Atp5sQ9CRA7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atp5sQ9CRA7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Atp5sQ9CRA7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Atp5sQ9CRA7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atp5sQ9CRA7 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atp5sQ9CRA7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Atp5sQ9CRA7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Atp5sQ9CRA7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.05■□□□□ 0.32
Atp5sQ9CRA7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atp5sQ9CRA7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atp5sQ9CRA7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atp5sQ9CRA7 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.05■□□□□ 0.32
Atp5sQ9CRA7 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atp5sQ9CRA7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Atp5sQ9CRA7 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.05■□□□□ 0.32
Atp5sQ9CRA7 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atp5sQ9CRA7 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Atp5sQ9CRA7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atp5sQ9CRA7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atp5sQ9CRA7 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atp5sQ9CRA7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.05■□□□□ 0.32
Atp5sQ9CRA7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.04■□□□□ 0.32
Atp5sQ9CRA7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Atp5sQ9CRA7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Atp5sQ9CRA7 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atp5sQ9CRA7 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Atp5sQ9CRA7 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.04■□□□□ 0.32
Atp5sQ9CRA7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atp5sQ9CRA7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.04■□□□□ 0.32
Atp5sQ9CRA7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Atp5sQ9CRA7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atp5sQ9CRA7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Atp5sQ9CRA7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atp5sQ9CRA7 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atp5sQ9CRA7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atp5sQ9CRA7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atp5sQ9CRA7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Atp5sQ9CRA7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.03■□□□□ 0.32
Atp5sQ9CRA7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Atp5sQ9CRA7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Atp5sQ9CRA7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atp5sQ9CRA7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atp5sQ9CRA7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms