Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retreg3Q9CQV4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retreg3Q9CQV4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.46■□□□□ 0.87
Retreg3Q9CQV4 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.46■□□□□ 0.87
Retreg3Q9CQV4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retreg3Q9CQV4 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
Retreg3Q9CQV4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retreg3Q9CQV4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retreg3Q9CQV4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retreg3Q9CQV4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retreg3Q9CQV4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Retreg3Q9CQV4 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retreg3Q9CQV4 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Retreg3Q9CQV4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retreg3Q9CQV4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retreg3Q9CQV4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retreg3Q9CQV4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retreg3Q9CQV4 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Retreg3Q9CQV4 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.44■□□□□ 0.86
Retreg3Q9CQV4 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Retreg3Q9CQV4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retreg3Q9CQV4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Retreg3Q9CQV4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retreg3Q9CQV4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retreg3Q9CQV4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retreg3Q9CQV4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retreg3Q9CQV4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retreg3Q9CQV4 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retreg3Q9CQV4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retreg3Q9CQV4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retreg3Q9CQV4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.43■□□□□ 0.86
Retreg3Q9CQV4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
Retreg3Q9CQV4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
Retreg3Q9CQV4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.43■□□□□ 0.86
Retreg3Q9CQV4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retreg3Q9CQV4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retreg3Q9CQV4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retreg3Q9CQV4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retreg3Q9CQV4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retreg3Q9CQV4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retreg3Q9CQV4 Gm12922-201ENSMUST00000120626 809 ntBASIC20.42■□□□□ 0.86
Retreg3Q9CQV4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retreg3Q9CQV4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retreg3Q9CQV4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retreg3Q9CQV4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retreg3Q9CQV4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retreg3Q9CQV4 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retreg3Q9CQV4 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retreg3Q9CQV4 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.41■□□□□ 0.86
Retreg3Q9CQV4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.41■□□□□ 0.86
Retreg3Q9CQV4 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.41■□□□□ 0.86
Retreg3Q9CQV4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retreg3Q9CQV4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retreg3Q9CQV4 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retreg3Q9CQV4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retreg3Q9CQV4 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
Retreg3Q9CQV4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retreg3Q9CQV4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retreg3Q9CQV4 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Retreg3Q9CQV4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retreg3Q9CQV4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.4■□□□□ 0.86
Retreg3Q9CQV4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retreg3Q9CQV4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retreg3Q9CQV4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retreg3Q9CQV4 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.39■□□□□ 0.85
Retreg3Q9CQV4 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retreg3Q9CQV4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Retreg3Q9CQV4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Retreg3Q9CQV4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.39■□□□□ 0.85
Retreg3Q9CQV4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retreg3Q9CQV4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retreg3Q9CQV4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retreg3Q9CQV4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retreg3Q9CQV4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retreg3Q9CQV4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Retreg3Q9CQV4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retreg3Q9CQV4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retreg3Q9CQV4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Retreg3Q9CQV4 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retreg3Q9CQV4 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retreg3Q9CQV4 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.38■□□□□ 0.85
Retreg3Q9CQV4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.38■□□□□ 0.85
Retreg3Q9CQV4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Retreg3Q9CQV4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Retreg3Q9CQV4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Retreg3Q9CQV4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Retreg3Q9CQV4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retreg3Q9CQV4 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Retreg3Q9CQV4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Retreg3Q9CQV4 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.37■□□□□ 0.85
Retreg3Q9CQV4 Serp2-204ENSMUST00000228055 705 ntBASIC20.37■□□□□ 0.85
Retreg3Q9CQV4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Retreg3Q9CQV4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retreg3Q9CQV4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
Retreg3Q9CQV4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retreg3Q9CQV4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retreg3Q9CQV4 Gm12821-201ENSMUST00000120022 600 ntBASIC20.36■□□□□ 0.85
Retreg3Q9CQV4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retreg3Q9CQV4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retreg3Q9CQV4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms