Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Gm9959-201ENSMUST00000068277 390 ntBASIC19.73■□□□□ 0.75
Trim16Q99PP9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim16Q99PP9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim16Q99PP9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim16Q99PP9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim16Q99PP9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim16Q99PP9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim16Q99PP9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.72■□□□□ 0.75
Trim16Q99PP9 Gm40881-201ENSMUST00000223397 166 ntBASIC19.72■□□□□ 0.75
Trim16Q99PP9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim16Q99PP9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Trim16Q99PP9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim16Q99PP9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim16Q99PP9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim16Q99PP9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim16Q99PP9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim16Q99PP9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim16Q99PP9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim16Q99PP9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Trim16Q99PP9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.71■□□□□ 0.75
Trim16Q99PP9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim16Q99PP9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim16Q99PP9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim16Q99PP9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim16Q99PP9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim16Q99PP9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Trim16Q99PP9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim16Q99PP9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.7■□□□□ 0.74
Trim16Q99PP9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim16Q99PP9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.7■□□□□ 0.74
Trim16Q99PP9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Trim16Q99PP9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Trim16Q99PP9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.69■□□□□ 0.74
Trim16Q99PP9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim16Q99PP9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.69■□□□□ 0.74
Trim16Q99PP9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim16Q99PP9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.69■□□□□ 0.74
Trim16Q99PP9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim16Q99PP9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim16Q99PP9 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim16Q99PP9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim16Q99PP9 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim16Q99PP9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim16Q99PP9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
Trim16Q99PP9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim16Q99PP9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Trim16Q99PP9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.68■□□□□ 0.74
Trim16Q99PP9 Gm45102-201ENSMUST00000207427 857 ntBASIC19.68■□□□□ 0.74
Trim16Q99PP9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim16Q99PP9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim16Q99PP9 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim16Q99PP9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim16Q99PP9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim16Q99PP9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Trim16Q99PP9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim16Q99PP9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Trim16Q99PP9 Rps24-207ENSMUST00000224568 714 ntBASIC19.67■□□□□ 0.74
Trim16Q99PP9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Trim16Q99PP9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim16Q99PP9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim16Q99PP9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim16Q99PP9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim16Q99PP9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Trim16Q99PP9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Trim16Q99PP9 Etf1-202ENSMUST00000180351 108 ntBASIC19.66■□□□□ 0.74
Trim16Q99PP9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.66■□□□□ 0.74
Trim16Q99PP9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.66■□□□□ 0.74
Trim16Q99PP9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim16Q99PP9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.66■□□□□ 0.74
Trim16Q99PP9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim16Q99PP9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim16Q99PP9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim16Q99PP9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Trim16Q99PP9 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.65■□□□□ 0.74
Trim16Q99PP9 Gm14117-201ENSMUST00000122417 843 ntBASIC19.65■□□□□ 0.74
Trim16Q99PP9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.65■□□□□ 0.74
Trim16Q99PP9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim16Q99PP9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim16Q99PP9 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.65■□□□□ 0.74
Trim16Q99PP9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim16Q99PP9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim16Q99PP9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim16Q99PP9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim16Q99PP9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Trim16Q99PP9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim16Q99PP9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Trim16Q99PP9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim16Q99PP9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim16Q99PP9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim16Q99PP9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim16Q99PP9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim16Q99PP9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim16Q99PP9 Iqck-206ENSMUST00000208658 2891 ntBASIC19.64■□□□□ 0.73
Trim16Q99PP9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.63■□□□□ 0.73
Trim16Q99PP9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim16Q99PP9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim16Q99PP9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.63■□□□□ 0.73
Trim16Q99PP9 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim16Q99PP9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim16Q99PP9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms