Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Col25a1Q99MQ5 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Col25a1Q99MQ5 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Col25a1Q99MQ5 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col25a1Q99MQ5 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.19■□□□□ 0.98
Col25a1Q99MQ5 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.19■□□□□ 0.98
Col25a1Q99MQ5 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Col25a1Q99MQ5 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Col25a1Q99MQ5 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Col25a1Q99MQ5 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
Col25a1Q99MQ5 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col25a1Q99MQ5 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col25a1Q99MQ5 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
Col25a1Q99MQ5 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col25a1Q99MQ5 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Col25a1Q99MQ5 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col25a1Q99MQ5 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.18■□□□□ 0.98
Col25a1Q99MQ5 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.18■□□□□ 0.98
Col25a1Q99MQ5 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col25a1Q99MQ5 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Col25a1Q99MQ5 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Col25a1Q99MQ5 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col25a1Q99MQ5 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.17■□□□□ 0.98
Col25a1Q99MQ5 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC21.17■□□□□ 0.98
Col25a1Q99MQ5 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col25a1Q99MQ5 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col25a1Q99MQ5 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col25a1Q99MQ5 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Col25a1Q99MQ5 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col25a1Q99MQ5 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col25a1Q99MQ5 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.16■□□□□ 0.98
Col25a1Q99MQ5 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col25a1Q99MQ5 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col25a1Q99MQ5 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col25a1Q99MQ5 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.15■□□□□ 0.98
Col25a1Q99MQ5 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col25a1Q99MQ5 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col25a1Q99MQ5 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col25a1Q99MQ5 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Col25a1Q99MQ5 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Col25a1Q99MQ5 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Col25a1Q99MQ5 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col25a1Q99MQ5 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Col25a1Q99MQ5 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.15■□□□□ 0.98
Col25a1Q99MQ5 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Col25a1Q99MQ5 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col25a1Q99MQ5 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col25a1Q99MQ5 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Col25a1Q99MQ5 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Col25a1Q99MQ5 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col25a1Q99MQ5 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col25a1Q99MQ5 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Col25a1Q99MQ5 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col25a1Q99MQ5 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col25a1Q99MQ5 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col25a1Q99MQ5 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.13■□□□□ 0.97
Col25a1Q99MQ5 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.13■□□□□ 0.97
Col25a1Q99MQ5 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Col25a1Q99MQ5 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col25a1Q99MQ5 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Col25a1Q99MQ5 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col25a1Q99MQ5 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Col25a1Q99MQ5 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Col25a1Q99MQ5 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col25a1Q99MQ5 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col25a1Q99MQ5 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Col25a1Q99MQ5 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col25a1Q99MQ5 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Col25a1Q99MQ5 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Col25a1Q99MQ5 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.12■□□□□ 0.97
Col25a1Q99MQ5 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col25a1Q99MQ5 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col25a1Q99MQ5 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col25a1Q99MQ5 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Col25a1Q99MQ5 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col25a1Q99MQ5 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col25a1Q99MQ5 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Col25a1Q99MQ5 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col25a1Q99MQ5 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Col25a1Q99MQ5 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Col25a1Q99MQ5 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Col25a1Q99MQ5 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.11■□□□□ 0.97
Col25a1Q99MQ5 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col25a1Q99MQ5 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col25a1Q99MQ5 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
Col25a1Q99MQ5 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Col25a1Q99MQ5 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Col25a1Q99MQ5 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col25a1Q99MQ5 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Col25a1Q99MQ5 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col25a1Q99MQ5 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Col25a1Q99MQ5 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col25a1Q99MQ5 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col25a1Q99MQ5 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Col25a1Q99MQ5 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col25a1Q99MQ5 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col25a1Q99MQ5 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col25a1Q99MQ5 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.09■□□□□ 0.97
Col25a1Q99MQ5 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.09■□□□□ 0.97
Col25a1Q99MQ5 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms