Protein–RNA interactions for Protein: Q99ME3

Sncaip, Synphilin-1, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaipQ99ME3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SncaipQ99ME3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SncaipQ99ME3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SncaipQ99ME3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SncaipQ99ME3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SncaipQ99ME3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SncaipQ99ME3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SncaipQ99ME3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SncaipQ99ME3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SncaipQ99ME3 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SncaipQ99ME3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SncaipQ99ME3 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.98■□□□□ 0.95
SncaipQ99ME3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SncaipQ99ME3 Gm15039-201ENSMUST00000118914 875 ntBASIC20.98■□□□□ 0.95
SncaipQ99ME3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SncaipQ99ME3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SncaipQ99ME3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SncaipQ99ME3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
SncaipQ99ME3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SncaipQ99ME3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SncaipQ99ME3 Gm22238-201ENSMUST00000175222 88 ntBASIC20.97■□□□□ 0.95
SncaipQ99ME3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SncaipQ99ME3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SncaipQ99ME3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SncaipQ99ME3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SncaipQ99ME3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SncaipQ99ME3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SncaipQ99ME3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SncaipQ99ME3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SncaipQ99ME3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.96■□□□□ 0.95
SncaipQ99ME3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SncaipQ99ME3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SncaipQ99ME3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SncaipQ99ME3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SncaipQ99ME3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SncaipQ99ME3 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.95■□□□□ 0.94
SncaipQ99ME3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SncaipQ99ME3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SncaipQ99ME3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.95■□□□□ 0.94
SncaipQ99ME3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SncaipQ99ME3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SncaipQ99ME3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SncaipQ99ME3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SncaipQ99ME3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SncaipQ99ME3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SncaipQ99ME3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SncaipQ99ME3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SncaipQ99ME3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SncaipQ99ME3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SncaipQ99ME3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SncaipQ99ME3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.94■□□□□ 0.94
SncaipQ99ME3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.94■□□□□ 0.94
SncaipQ99ME3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SncaipQ99ME3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.94■□□□□ 0.94
SncaipQ99ME3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.94■□□□□ 0.94
SncaipQ99ME3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SncaipQ99ME3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SncaipQ99ME3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SncaipQ99ME3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.93■□□□□ 0.94
SncaipQ99ME3 Gm7143-201ENSMUST00000222811 859 ntBASIC20.93■□□□□ 0.94
SncaipQ99ME3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SncaipQ99ME3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SncaipQ99ME3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SncaipQ99ME3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SncaipQ99ME3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SncaipQ99ME3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SncaipQ99ME3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SncaipQ99ME3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SncaipQ99ME3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SncaipQ99ME3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SncaipQ99ME3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SncaipQ99ME3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SncaipQ99ME3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.92■□□□□ 0.94
SncaipQ99ME3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SncaipQ99ME3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SncaipQ99ME3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SncaipQ99ME3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SncaipQ99ME3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
SncaipQ99ME3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SncaipQ99ME3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SncaipQ99ME3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SncaipQ99ME3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SncaipQ99ME3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.91■□□□□ 0.94
SncaipQ99ME3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SncaipQ99ME3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SncaipQ99ME3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SncaipQ99ME3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SncaipQ99ME3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SncaipQ99ME3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SncaipQ99ME3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SncaipQ99ME3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SncaipQ99ME3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SncaipQ99ME3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SncaipQ99ME3 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
SncaipQ99ME3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SncaipQ99ME3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SncaipQ99ME3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SncaipQ99ME3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SncaipQ99ME3 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SncaipQ99ME3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms