Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdk9Q99J95 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdk9Q99J95 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cdk9Q99J95 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdk9Q99J95 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdk9Q99J95 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdk9Q99J95 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
Cdk9Q99J95 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdk9Q99J95 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdk9Q99J95 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cdk9Q99J95 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.37■□□□□ 0.85
Cdk9Q99J95 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdk9Q99J95 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cdk9Q99J95 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdk9Q99J95 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdk9Q99J95 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdk9Q99J95 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdk9Q99J95 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdk9Q99J95 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Cdk9Q99J95 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.36■□□□□ 0.85
Cdk9Q99J95 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdk9Q99J95 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdk9Q99J95 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdk9Q99J95 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdk9Q99J95 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdk9Q99J95 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdk9Q99J95 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdk9Q99J95 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdk9Q99J95 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.36■□□□□ 0.85
Cdk9Q99J95 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdk9Q99J95 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdk9Q99J95 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Cdk9Q99J95 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cdk9Q99J95 Gm14523-201ENSMUST00000117260 558 ntBASIC20.35■□□□□ 0.85
Cdk9Q99J95 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdk9Q99J95 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cdk9Q99J95 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.35■□□□□ 0.85
Cdk9Q99J95 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdk9Q99J95 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdk9Q99J95 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.35■□□□□ 0.85
Cdk9Q99J95 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cdk9Q99J95 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Cdk9Q99J95 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdk9Q99J95 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdk9Q99J95 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdk9Q99J95 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdk9Q99J95 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Cdk9Q99J95 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdk9Q99J95 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.34■□□□□ 0.85
Cdk9Q99J95 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdk9Q99J95 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdk9Q99J95 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdk9Q99J95 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cdk9Q99J95 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdk9Q99J95 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdk9Q99J95 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdk9Q99J95 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Cdk9Q99J95 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdk9Q99J95 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdk9Q99J95 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cdk9Q99J95 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdk9Q99J95 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Cdk9Q99J95 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Cdk9Q99J95 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.33■□□□□ 0.84
Cdk9Q99J95 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cdk9Q99J95 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdk9Q99J95 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.32■□□□□ 0.84
Cdk9Q99J95 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cdk9Q99J95 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Cdk9Q99J95 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cdk9Q99J95 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cdk9Q99J95 Gm7332-201ENSMUST00000118351 454 ntBASIC20.32■□□□□ 0.84
Cdk9Q99J95 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdk9Q99J95 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdk9Q99J95 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cdk9Q99J95 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdk9Q99J95 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdk9Q99J95 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdk9Q99J95 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdk9Q99J95 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdk9Q99J95 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdk9Q99J95 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cdk9Q99J95 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdk9Q99J95 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cdk9Q99J95 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cdk9Q99J95 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdk9Q99J95 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdk9Q99J95 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.3■□□□□ 0.84
Cdk9Q99J95 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cdk9Q99J95 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cdk9Q99J95 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cdk9Q99J95 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cdk9Q99J95 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdk9Q99J95 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cdk9Q99J95 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Cdk9Q99J95 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.3■□□□□ 0.84
Cdk9Q99J95 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdk9Q99J95 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cdk9Q99J95 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Cdk9Q99J95 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms