Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Smc1bQ920F6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Smc1bQ920F6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Smc1bQ920F6 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Smc1bQ920F6 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC23.34■■□□□ 1.33
Smc1bQ920F6 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Smc1bQ920F6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
Smc1bQ920F6 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Smc1bQ920F6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Smc1bQ920F6 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Smc1bQ920F6 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Smc1bQ920F6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
Smc1bQ920F6 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Smc1bQ920F6 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC23.33■■□□□ 1.33
Smc1bQ920F6 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC23.33■■□□□ 1.33
Smc1bQ920F6 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Smc1bQ920F6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Smc1bQ920F6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Smc1bQ920F6 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Smc1bQ920F6 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Smc1bQ920F6 Gm7291-201ENSMUST00000199147 382 ntBASIC23.32■■□□□ 1.32
Smc1bQ920F6 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Smc1bQ920F6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Smc1bQ920F6 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Smc1bQ920F6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Smc1bQ920F6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Smc1bQ920F6 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC23.31■■□□□ 1.32
Smc1bQ920F6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Smc1bQ920F6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC23.31■■□□□ 1.32
Smc1bQ920F6 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Smc1bQ920F6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Smc1bQ920F6 Wdr70-203ENSMUST00000227371 1130 ntBASIC23.3■■□□□ 1.32
Smc1bQ920F6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Smc1bQ920F6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Smc1bQ920F6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Smc1bQ920F6 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Smc1bQ920F6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC23.29■■□□□ 1.32
Smc1bQ920F6 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
Smc1bQ920F6 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC23.29■■□□□ 1.32
Smc1bQ920F6 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Smc1bQ920F6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC23.29■■□□□ 1.32
Smc1bQ920F6 AC115037.1-201ENSMUST00000223391 2173 ntBASIC23.28■■□□□ 1.32
Smc1bQ920F6 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Smc1bQ920F6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC23.28■■□□□ 1.32
Smc1bQ920F6 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Smc1bQ920F6 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
Smc1bQ920F6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC23.28■■□□□ 1.32
Smc1bQ920F6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Smc1bQ920F6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Smc1bQ920F6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Smc1bQ920F6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Smc1bQ920F6 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Smc1bQ920F6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Smc1bQ920F6 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Smc1bQ920F6 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Smc1bQ920F6 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Smc1bQ920F6 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC23.27■■□□□ 1.32
Smc1bQ920F6 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Smc1bQ920F6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Smc1bQ920F6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Smc1bQ920F6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.31
Smc1bQ920F6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Smc1bQ920F6 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Smc1bQ920F6 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC23.26■■□□□ 1.31
Smc1bQ920F6 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Smc1bQ920F6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Smc1bQ920F6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Smc1bQ920F6 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC23.25■■□□□ 1.31
Smc1bQ920F6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Smc1bQ920F6 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC23.25■■□□□ 1.31
Smc1bQ920F6 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Smc1bQ920F6 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Smc1bQ920F6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Smc1bQ920F6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Smc1bQ920F6 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Smc1bQ920F6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Smc1bQ920F6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Smc1bQ920F6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Smc1bQ920F6 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Smc1bQ920F6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC23.24■■□□□ 1.31
Smc1bQ920F6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Smc1bQ920F6 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Smc1bQ920F6 Gm12504-201ENSMUST00000120860 2231 ntBASIC23.24■■□□□ 1.31
Smc1bQ920F6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Smc1bQ920F6 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Smc1bQ920F6 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Smc1bQ920F6 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Smc1bQ920F6 Gm5576-201ENSMUST00000075809 1236 ntBASIC23.23■■□□□ 1.31
Smc1bQ920F6 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Smc1bQ920F6 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Smc1bQ920F6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Smc1bQ920F6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC23.23■■□□□ 1.31
Smc1bQ920F6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Smc1bQ920F6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Smc1bQ920F6 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC23.22■■□□□ 1.31
Smc1bQ920F6 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Smc1bQ920F6 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
Smc1bQ920F6 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Smc1bQ920F6 AC112142.1-201ENSMUST00000228796 918 ntBASIC23.22■■□□□ 1.31
Smc1bQ920F6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms