Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdha1Q91Y21 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdha1Q91Y21 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.22■□□□□ 0.99
Pcdha1Q91Y21 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.22■□□□□ 0.99
Pcdha1Q91Y21 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.22■□□□□ 0.99
Pcdha1Q91Y21 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdha1Q91Y21 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdha1Q91Y21 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdha1Q91Y21 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdha1Q91Y21 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Pcdha1Q91Y21 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.21■□□□□ 0.99
Pcdha1Q91Y21 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.21■□□□□ 0.99
Pcdha1Q91Y21 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.21■□□□□ 0.99
Pcdha1Q91Y21 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdha1Q91Y21 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdha1Q91Y21 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdha1Q91Y21 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdha1Q91Y21 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdha1Q91Y21 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Pcdha1Q91Y21 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.2■□□□□ 0.98
Pcdha1Q91Y21 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdha1Q91Y21 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdha1Q91Y21 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdha1Q91Y21 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdha1Q91Y21 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdha1Q91Y21 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdha1Q91Y21 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdha1Q91Y21 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Pcdha1Q91Y21 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdha1Q91Y21 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdha1Q91Y21 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdha1Q91Y21 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdha1Q91Y21 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdha1Q91Y21 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdha1Q91Y21 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Pcdha1Q91Y21 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.18■□□□□ 0.98
Pcdha1Q91Y21 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdha1Q91Y21 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdha1Q91Y21 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdha1Q91Y21 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdha1Q91Y21 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdha1Q91Y21 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdha1Q91Y21 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdha1Q91Y21 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.17■□□□□ 0.98
Pcdha1Q91Y21 Gm43137-201ENSMUST00000198052 594 ntBASIC21.17■□□□□ 0.98
Pcdha1Q91Y21 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdha1Q91Y21 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdha1Q91Y21 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdha1Q91Y21 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdha1Q91Y21 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdha1Q91Y21 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdha1Q91Y21 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Pcdha1Q91Y21 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
Pcdha1Q91Y21 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.16■□□□□ 0.98
Pcdha1Q91Y21 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Pcdha1Q91Y21 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdha1Q91Y21 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
Pcdha1Q91Y21 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.15■□□□□ 0.98
Pcdha1Q91Y21 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdha1Q91Y21 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdha1Q91Y21 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.14■□□□□ 0.98
Pcdha1Q91Y21 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdha1Q91Y21 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdha1Q91Y21 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdha1Q91Y21 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdha1Q91Y21 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Pcdha1Q91Y21 Gm6139-201ENSMUST00000079261 882 ntBASIC21.14■□□□□ 0.97
Pcdha1Q91Y21 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdha1Q91Y21 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.13■□□□□ 0.97
Pcdha1Q91Y21 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdha1Q91Y21 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.13■□□□□ 0.97
Pcdha1Q91Y21 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdha1Q91Y21 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdha1Q91Y21 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.13■□□□□ 0.97
Pcdha1Q91Y21 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.13■□□□□ 0.97
Pcdha1Q91Y21 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.13■□□□□ 0.97
Pcdha1Q91Y21 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Pcdha1Q91Y21 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdha1Q91Y21 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Pcdha1Q91Y21 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdha1Q91Y21 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdha1Q91Y21 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdha1Q91Y21 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdha1Q91Y21 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Pcdha1Q91Y21 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Pcdha1Q91Y21 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdha1Q91Y21 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdha1Q91Y21 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdha1Q91Y21 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdha1Q91Y21 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdha1Q91Y21 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.11■□□□□ 0.97
Pcdha1Q91Y21 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdha1Q91Y21 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdha1Q91Y21 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdha1Q91Y21 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.11■□□□□ 0.97
Pcdha1Q91Y21 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha1Q91Y21 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.1■□□□□ 0.97
Pcdha1Q91Y21 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.1■□□□□ 0.97
Pcdha1Q91Y21 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.1■□□□□ 0.97
Pcdha1Q91Y21 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms