Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha8Q91Y12 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Pcdha8Q91Y12 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha8Q91Y12 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.75■□□□□ 0.75
Pcdha8Q91Y12 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha8Q91Y12 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha8Q91Y12 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha8Q91Y12 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha8Q91Y12 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha8Q91Y12 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.73■□□□□ 0.75
Pcdha8Q91Y12 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha8Q91Y12 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Pcdha8Q91Y12 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha8Q91Y12 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha8Q91Y12 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.73■□□□□ 0.75
Pcdha8Q91Y12 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha8Q91Y12 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.73■□□□□ 0.75
Pcdha8Q91Y12 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha8Q91Y12 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Pcdha8Q91Y12 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha8Q91Y12 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Pcdha8Q91Y12 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Pcdha8Q91Y12 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Pcdha8Q91Y12 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha8Q91Y12 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.72■□□□□ 0.75
Pcdha8Q91Y12 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha8Q91Y12 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha8Q91Y12 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha8Q91Y12 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha8Q91Y12 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.71■□□□□ 0.75
Pcdha8Q91Y12 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.71■□□□□ 0.75
Pcdha8Q91Y12 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha8Q91Y12 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Pcdha8Q91Y12 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.71■□□□□ 0.75
Pcdha8Q91Y12 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha8Q91Y12 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha8Q91Y12 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha8Q91Y12 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.7■□□□□ 0.74
Pcdha8Q91Y12 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha8Q91Y12 Iqck-206ENSMUST00000208658 2891 ntBASIC19.69■□□□□ 0.74
Pcdha8Q91Y12 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha8Q91Y12 Gm7417-201ENSMUST00000192950 473 ntBASIC19.69■□□□□ 0.74
Pcdha8Q91Y12 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.69■□□□□ 0.74
Pcdha8Q91Y12 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha8Q91Y12 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha8Q91Y12 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.68■□□□□ 0.74
Pcdha8Q91Y12 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha8Q91Y12 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha8Q91Y12 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha8Q91Y12 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha8Q91Y12 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha8Q91Y12 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha8Q91Y12 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Pcdha8Q91Y12 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha8Q91Y12 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha8Q91Y12 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha8Q91Y12 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha8Q91Y12 Etf1-202ENSMUST00000180351 108 ntBASIC19.67■□□□□ 0.74
Pcdha8Q91Y12 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.67■□□□□ 0.74
Pcdha8Q91Y12 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha8Q91Y12 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.67■□□□□ 0.74
Pcdha8Q91Y12 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.67■□□□□ 0.74
Pcdha8Q91Y12 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Pcdha8Q91Y12 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha8Q91Y12 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha8Q91Y12 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha8Q91Y12 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.66■□□□□ 0.74
Pcdha8Q91Y12 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha8Q91Y12 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha8Q91Y12 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha8Q91Y12 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha8Q91Y12 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha8Q91Y12 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha8Q91Y12 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Pcdha8Q91Y12 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha8Q91Y12 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha8Q91Y12 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.65■□□□□ 0.74
Pcdha8Q91Y12 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha8Q91Y12 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha8Q91Y12 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha8Q91Y12 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha8Q91Y12 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha8Q91Y12 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdha8Q91Y12 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha8Q91Y12 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha8Q91Y12 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.64■□□□□ 0.73
Pcdha8Q91Y12 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Pcdha8Q91Y12 Gm9959-201ENSMUST00000068277 390 ntBASIC19.64■□□□□ 0.73
Pcdha8Q91Y12 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha8Q91Y12 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha8Q91Y12 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha8Q91Y12 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha8Q91Y12 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha8Q91Y12 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha8Q91Y12 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha8Q91Y12 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha8Q91Y12 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Pcdha8Q91Y12 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha8Q91Y12 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Pcdha8Q91Y12 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms