Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.29■■□□□ 1.16
Pcdhac2Q91Y09 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhac2Q91Y09 Gm10849-201ENSMUST00000100397 618 ntBASIC22.29■■□□□ 1.16
Pcdhac2Q91Y09 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhac2Q91Y09 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhac2Q91Y09 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhac2Q91Y09 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Pcdhac2Q91Y09 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
Pcdhac2Q91Y09 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhac2Q91Y09 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Pcdhac2Q91Y09 Gm10209-201ENSMUST00000203397 1607 ntBASIC22.28■■□□□ 1.16
Pcdhac2Q91Y09 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC22.28■■□□□ 1.16
Pcdhac2Q91Y09 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Pcdhac2Q91Y09 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Pcdhac2Q91Y09 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhac2Q91Y09 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC22.28■■□□□ 1.16
Pcdhac2Q91Y09 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhac2Q91Y09 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhac2Q91Y09 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhac2Q91Y09 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhac2Q91Y09 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhac2Q91Y09 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhac2Q91Y09 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC22.27■■□□□ 1.16
Pcdhac2Q91Y09 Gm10493-201ENSMUST00000097270 612 ntBASIC22.27■■□□□ 1.16
Pcdhac2Q91Y09 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhac2Q91Y09 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhac2Q91Y09 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
Pcdhac2Q91Y09 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhac2Q91Y09 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhac2Q91Y09 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhac2Q91Y09 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhac2Q91Y09 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhac2Q91Y09 Gm42569-201ENSMUST00000200539 472 ntBASIC22.26■■□□□ 1.15
Pcdhac2Q91Y09 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhac2Q91Y09 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhac2Q91Y09 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhac2Q91Y09 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Pcdhac2Q91Y09 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhac2Q91Y09 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhac2Q91Y09 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhac2Q91Y09 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC22.25■■□□□ 1.15
Pcdhac2Q91Y09 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC22.25■■□□□ 1.15
Pcdhac2Q91Y09 Smad6-203ENSMUST00000179458 273 ntBASIC22.25■■□□□ 1.15
Pcdhac2Q91Y09 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC22.25■■□□□ 1.15
Pcdhac2Q91Y09 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC22.25■■□□□ 1.15
Pcdhac2Q91Y09 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhac2Q91Y09 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhac2Q91Y09 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhac2Q91Y09 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhac2Q91Y09 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhac2Q91Y09 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhac2Q91Y09 Gm37415-201ENSMUST00000192265 2054 ntBASIC22.24■■□□□ 1.15
Pcdhac2Q91Y09 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhac2Q91Y09 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhac2Q91Y09 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhac2Q91Y09 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC22.24■■□□□ 1.15
Pcdhac2Q91Y09 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC22.24■■□□□ 1.15
Pcdhac2Q91Y09 AC165080.2-201ENSMUST00000217491 1530 ntBASIC22.24■■□□□ 1.15
Pcdhac2Q91Y09 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhac2Q91Y09 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhac2Q91Y09 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhac2Q91Y09 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhac2Q91Y09 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhac2Q91Y09 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC22.23■■□□□ 1.15
Pcdhac2Q91Y09 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC22.23■■□□□ 1.15
Pcdhac2Q91Y09 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhac2Q91Y09 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhac2Q91Y09 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhac2Q91Y09 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhac2Q91Y09 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhac2Q91Y09 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC22.22■■□□□ 1.15
Pcdhac2Q91Y09 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhac2Q91Y09 AC099934.2-201ENSMUST00000196389 70 ntBASIC22.22■■□□□ 1.15
Pcdhac2Q91Y09 AC156953.1-201ENSMUST00000196953 70 ntBASIC22.22■■□□□ 1.15
Pcdhac2Q91Y09 AC157822.2-201ENSMUST00000200291 70 ntBASIC22.22■■□□□ 1.15
Pcdhac2Q91Y09 Gm42642-201ENSMUST00000200683 355 ntBASIC22.22■■□□□ 1.15
Pcdhac2Q91Y09 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhac2Q91Y09 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhac2Q91Y09 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC22.22■■□□□ 1.15
Pcdhac2Q91Y09 Gm43403-201ENSMUST00000198011 1786 ntBASIC22.22■■□□□ 1.15
Pcdhac2Q91Y09 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhac2Q91Y09 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhac2Q91Y09 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC22.21■■□□□ 1.15
Pcdhac2Q91Y09 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhac2Q91Y09 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhac2Q91Y09 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhac2Q91Y09 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhac2Q91Y09 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhac2Q91Y09 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhac2Q91Y09 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC22.21■■□□□ 1.15
Pcdhac2Q91Y09 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhac2Q91Y09 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhac2Q91Y09 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC22.2■■□□□ 1.14
Pcdhac2Q91Y09 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhac2Q91Y09 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhac2Q91Y09 Gm10129-202ENSMUST00000193100 1316 ntBASIC22.2■■□□□ 1.14
Pcdhac2Q91Y09 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhac2Q91Y09 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhac2Q91Y09 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhac2Q91Y09 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC22.19■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms