Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb3Q91XZ7 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb3Q91XZ7 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb3Q91XZ7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb3Q91XZ7 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb3Q91XZ7 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.15■□□□□ 0.82
Pcdhb3Q91XZ7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Pcdhb3Q91XZ7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb3Q91XZ7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb3Q91XZ7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb3Q91XZ7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb3Q91XZ7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Pcdhb3Q91XZ7 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.14■□□□□ 0.81
Pcdhb3Q91XZ7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb3Q91XZ7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb3Q91XZ7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.14■□□□□ 0.81
Pcdhb3Q91XZ7 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Pcdhb3Q91XZ7 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Pcdhb3Q91XZ7 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb3Q91XZ7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
Pcdhb3Q91XZ7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb3Q91XZ7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb3Q91XZ7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
Pcdhb3Q91XZ7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.13■□□□□ 0.81
Pcdhb3Q91XZ7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
Pcdhb3Q91XZ7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb3Q91XZ7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb3Q91XZ7 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb3Q91XZ7 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb3Q91XZ7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb3Q91XZ7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb3Q91XZ7 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb3Q91XZ7 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb3Q91XZ7 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb3Q91XZ7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Pcdhb3Q91XZ7 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb3Q91XZ7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb3Q91XZ7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb3Q91XZ7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb3Q91XZ7 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb3Q91XZ7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb3Q91XZ7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb3Q91XZ7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb3Q91XZ7 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Pcdhb3Q91XZ7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb3Q91XZ7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb3Q91XZ7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb3Q91XZ7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb3Q91XZ7 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Pcdhb3Q91XZ7 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb3Q91XZ7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.1■□□□□ 0.81
Pcdhb3Q91XZ7 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb3Q91XZ7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb3Q91XZ7 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb3Q91XZ7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.1■□□□□ 0.81
Pcdhb3Q91XZ7 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.1■□□□□ 0.81
Pcdhb3Q91XZ7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Pcdhb3Q91XZ7 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb3Q91XZ7 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb3Q91XZ7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb3Q91XZ7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb3Q91XZ7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb3Q91XZ7 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb3Q91XZ7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb3Q91XZ7 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb3Q91XZ7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb3Q91XZ7 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Pcdhb3Q91XZ7 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb3Q91XZ7 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Pcdhb3Q91XZ7 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb3Q91XZ7 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.09■□□□□ 0.81
Pcdhb3Q91XZ7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Pcdhb3Q91XZ7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb3Q91XZ7 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.08■□□□□ 0.81
Pcdhb3Q91XZ7 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb3Q91XZ7 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb3Q91XZ7 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb3Q91XZ7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Pcdhb3Q91XZ7 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Pcdhb3Q91XZ7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb3Q91XZ7 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Pcdhb3Q91XZ7 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Pcdhb3Q91XZ7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb3Q91XZ7 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Pcdhb3Q91XZ7 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb3Q91XZ7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb3Q91XZ7 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb3Q91XZ7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb3Q91XZ7 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb3Q91XZ7 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb3Q91XZ7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb3Q91XZ7 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Pcdhb3Q91XZ7 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb3Q91XZ7 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb3Q91XZ7 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb3Q91XZ7 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb3Q91XZ7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb3Q91XZ7 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb3Q91XZ7 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.06■□□□□ 0.8
Pcdhb3Q91XZ7 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms