Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhgb4Q91XX6 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Pcdhgb4Q91XX6 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Pcdhgb4Q91XX6 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.51■■□□□ 1.03
Pcdhgb4Q91XX6 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhgb4Q91XX6 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhgb4Q91XX6 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhgb4Q91XX6 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhgb4Q91XX6 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhgb4Q91XX6 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.5■■□□□ 1.03
Pcdhgb4Q91XX6 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Pcdhgb4Q91XX6 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.5■■□□□ 1.03
Pcdhgb4Q91XX6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.5■■□□□ 1.03
Pcdhgb4Q91XX6 Gm40881-201ENSMUST00000223397 166 ntBASIC21.5■■□□□ 1.03
Pcdhgb4Q91XX6 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.5■■□□□ 1.03
Pcdhgb4Q91XX6 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Pcdhgb4Q91XX6 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhgb4Q91XX6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhgb4Q91XX6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhgb4Q91XX6 Gm5812-201ENSMUST00000061073 957 ntBASIC21.49■■□□□ 1.03
Pcdhgb4Q91XX6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhgb4Q91XX6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
Pcdhgb4Q91XX6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhgb4Q91XX6 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhgb4Q91XX6 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhgb4Q91XX6 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhgb4Q91XX6 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhgb4Q91XX6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Pcdhgb4Q91XX6 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhgb4Q91XX6 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.48■■□□□ 1.03
Pcdhgb4Q91XX6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.48■■□□□ 1.03
Pcdhgb4Q91XX6 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhgb4Q91XX6 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.48■■□□□ 1.03
Pcdhgb4Q91XX6 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Pcdhgb4Q91XX6 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhgb4Q91XX6 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhgb4Q91XX6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhgb4Q91XX6 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
Pcdhgb4Q91XX6 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.47■■□□□ 1.03
Pcdhgb4Q91XX6 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Pcdhgb4Q91XX6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Pcdhgb4Q91XX6 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhgb4Q91XX6 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhgb4Q91XX6 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhgb4Q91XX6 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhgb4Q91XX6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhgb4Q91XX6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhgb4Q91XX6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhgb4Q91XX6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhgb4Q91XX6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhgb4Q91XX6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhgb4Q91XX6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhgb4Q91XX6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.46■■□□□ 1.03
Pcdhgb4Q91XX6 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Pcdhgb4Q91XX6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhgb4Q91XX6 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhgb4Q91XX6 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.46■■□□□ 1.03
Pcdhgb4Q91XX6 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
Pcdhgb4Q91XX6 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Pcdhgb4Q91XX6 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhgb4Q91XX6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhgb4Q91XX6 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.45■■□□□ 1.02
Pcdhgb4Q91XX6 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhgb4Q91XX6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhgb4Q91XX6 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Pcdhgb4Q91XX6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhgb4Q91XX6 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.44■■□□□ 1.02
Pcdhgb4Q91XX6 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhgb4Q91XX6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhgb4Q91XX6 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhgb4Q91XX6 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhgb4Q91XX6 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.44■■□□□ 1.02
Pcdhgb4Q91XX6 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Pcdhgb4Q91XX6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhgb4Q91XX6 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhgb4Q91XX6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhgb4Q91XX6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhgb4Q91XX6 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhgb4Q91XX6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhgb4Q91XX6 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhgb4Q91XX6 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.43■■□□□ 1.02
Pcdhgb4Q91XX6 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhgb4Q91XX6 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhgb4Q91XX6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.43■■□□□ 1.02
Pcdhgb4Q91XX6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
Pcdhgb4Q91XX6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhgb4Q91XX6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Pcdhgb4Q91XX6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhgb4Q91XX6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.43■■□□□ 1.02
Pcdhgb4Q91XX6 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.43■■□□□ 1.02
Pcdhgb4Q91XX6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhgb4Q91XX6 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhgb4Q91XX6 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhgb4Q91XX6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhgb4Q91XX6 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.42■■□□□ 1.02
Pcdhgb4Q91XX6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.42■■□□□ 1.02
Pcdhgb4Q91XX6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhgb4Q91XX6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhgb4Q91XX6 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhgb4Q91XX6 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms