Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgb5Q91XX5 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgb5Q91XX5 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.21■□□□□ 0.83
Pcdhgb5Q91XX5 Gm26833-201ENSMUST00000180899 440 ntBASIC20.21■□□□□ 0.83
Pcdhgb5Q91XX5 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgb5Q91XX5 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgb5Q91XX5 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgb5Q91XX5 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Pcdhgb5Q91XX5 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhgb5Q91XX5 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhgb5Q91XX5 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhgb5Q91XX5 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhgb5Q91XX5 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhgb5Q91XX5 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhgb5Q91XX5 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhgb5Q91XX5 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhgb5Q91XX5 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Pcdhgb5Q91XX5 Gm12251-201ENSMUST00000117893 792 ntBASIC20.19■□□□□ 0.82
Pcdhgb5Q91XX5 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgb5Q91XX5 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgb5Q91XX5 Gm5874-201ENSMUST00000096101 508 ntBASIC20.19■□□□□ 0.82
Pcdhgb5Q91XX5 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgb5Q91XX5 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Pcdhgb5Q91XX5 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgb5Q91XX5 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgb5Q91XX5 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgb5Q91XX5 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgb5Q91XX5 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.18■□□□□ 0.82
Pcdhgb5Q91XX5 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgb5Q91XX5 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.18■□□□□ 0.82
Pcdhgb5Q91XX5 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.18■□□□□ 0.82
Pcdhgb5Q91XX5 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgb5Q91XX5 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Pcdhgb5Q91XX5 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgb5Q91XX5 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgb5Q91XX5 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgb5Q91XX5 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgb5Q91XX5 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgb5Q91XX5 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgb5Q91XX5 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgb5Q91XX5 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Pcdhgb5Q91XX5 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgb5Q91XX5 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgb5Q91XX5 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgb5Q91XX5 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgb5Q91XX5 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.17■□□□□ 0.82
Pcdhgb5Q91XX5 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Pcdhgb5Q91XX5 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgb5Q91XX5 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.16■□□□□ 0.82
Pcdhgb5Q91XX5 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.16■□□□□ 0.82
Pcdhgb5Q91XX5 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgb5Q91XX5 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgb5Q91XX5 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgb5Q91XX5 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.16■□□□□ 0.82
Pcdhgb5Q91XX5 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgb5Q91XX5 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgb5Q91XX5 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Pcdhgb5Q91XX5 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgb5Q91XX5 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Pcdhgb5Q91XX5 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Pcdhgb5Q91XX5 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgb5Q91XX5 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.15■□□□□ 0.82
Pcdhgb5Q91XX5 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.15■□□□□ 0.82
Pcdhgb5Q91XX5 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgb5Q91XX5 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgb5Q91XX5 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.15■□□□□ 0.82
Pcdhgb5Q91XX5 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Pcdhgb5Q91XX5 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhgb5Q91XX5 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Pcdhgb5Q91XX5 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Pcdhgb5Q91XX5 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
Pcdhgb5Q91XX5 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.14■□□□□ 0.81
Pcdhgb5Q91XX5 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.14■□□□□ 0.81
Pcdhgb5Q91XX5 Gm43060-201ENSMUST00000200621 289 ntBASIC20.14■□□□□ 0.81
Pcdhgb5Q91XX5 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhgb5Q91XX5 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Pcdhgb5Q91XX5 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Pcdhgb5Q91XX5 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgb5Q91XX5 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgb5Q91XX5 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Pcdhgb5Q91XX5 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgb5Q91XX5 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgb5Q91XX5 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.13■□□□□ 0.81
Pcdhgb5Q91XX5 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.13■□□□□ 0.81
Pcdhgb5Q91XX5 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgb5Q91XX5 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgb5Q91XX5 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgb5Q91XX5 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgb5Q91XX5 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgb5Q91XX5 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgb5Q91XX5 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgb5Q91XX5 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgb5Q91XX5 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgb5Q91XX5 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.12■□□□□ 0.81
Pcdhgb5Q91XX5 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgb5Q91XX5 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgb5Q91XX5 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgb5Q91XX5 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Pcdhgb5Q91XX5 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgb5Q91XX5 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms