Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.03■□□□□ 0.8
Retreg1dQ8VE91 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retreg1dQ8VE91 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retreg1dQ8VE91 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retreg1dQ8VE91 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retreg1dQ8VE91 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retreg1dQ8VE91 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Retreg1dQ8VE91 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retreg1dQ8VE91 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retreg1dQ8VE91 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retreg1dQ8VE91 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retreg1dQ8VE91 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.02■□□□□ 0.8
Retreg1dQ8VE91 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Retreg1dQ8VE91 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retreg1dQ8VE91 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.01■□□□□ 0.79
Retreg1dQ8VE91 Gm12821-201ENSMUST00000120022 600 ntBASIC20.01■□□□□ 0.79
Retreg1dQ8VE91 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.01■□□□□ 0.79
Retreg1dQ8VE91 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retreg1dQ8VE91 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retreg1dQ8VE91 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retreg1dQ8VE91 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retreg1dQ8VE91 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retreg1dQ8VE91 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.01■□□□□ 0.79
Retreg1dQ8VE91 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retreg1dQ8VE91 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Retreg1dQ8VE91 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
Retreg1dQ8VE91 Gm27454-201ENSMUST00000185090 204 ntBASIC20■□□□□ 0.79
Retreg1dQ8VE91 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Retreg1dQ8VE91 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retreg1dQ8VE91 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retreg1dQ8VE91 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.99■□□□□ 0.79
Retreg1dQ8VE91 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retreg1dQ8VE91 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retreg1dQ8VE91 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Retreg1dQ8VE91 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retreg1dQ8VE91 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retreg1dQ8VE91 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retreg1dQ8VE91 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retreg1dQ8VE91 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retreg1dQ8VE91 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retreg1dQ8VE91 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Retreg1dQ8VE91 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retreg1dQ8VE91 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retreg1dQ8VE91 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retreg1dQ8VE91 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retreg1dQ8VE91 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retreg1dQ8VE91 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.98■□□□□ 0.79
Retreg1dQ8VE91 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.98■□□□□ 0.79
Retreg1dQ8VE91 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retreg1dQ8VE91 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Retreg1dQ8VE91 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retreg1dQ8VE91 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.98■□□□□ 0.79
Retreg1dQ8VE91 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retreg1dQ8VE91 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Retreg1dQ8VE91 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retreg1dQ8VE91 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retreg1dQ8VE91 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Retreg1dQ8VE91 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retreg1dQ8VE91 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retreg1dQ8VE91 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
Retreg1dQ8VE91 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retreg1dQ8VE91 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retreg1dQ8VE91 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retreg1dQ8VE91 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Retreg1dQ8VE91 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Retreg1dQ8VE91 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Retreg1dQ8VE91 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retreg1dQ8VE91 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retreg1dQ8VE91 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.96■□□□□ 0.79
Retreg1dQ8VE91 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.96■□□□□ 0.79
Retreg1dQ8VE91 Gm45417-201ENSMUST00000209533 758 ntBASIC19.96■□□□□ 0.79
Retreg1dQ8VE91 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.96■□□□□ 0.79
Retreg1dQ8VE91 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retreg1dQ8VE91 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retreg1dQ8VE91 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retreg1dQ8VE91 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
Retreg1dQ8VE91 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retreg1dQ8VE91 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retreg1dQ8VE91 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retreg1dQ8VE91 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retreg1dQ8VE91 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retreg1dQ8VE91 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retreg1dQ8VE91 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retreg1dQ8VE91 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retreg1dQ8VE91 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retreg1dQ8VE91 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retreg1dQ8VE91 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retreg1dQ8VE91 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retreg1dQ8VE91 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.94■□□□□ 0.78
Retreg1dQ8VE91 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retreg1dQ8VE91 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retreg1dQ8VE91 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retreg1dQ8VE91 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retreg1dQ8VE91 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retreg1dQ8VE91 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retreg1dQ8VE91 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retreg1dQ8VE91 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retreg1dQ8VE91 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Retreg1dQ8VE91 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retreg1dQ8VE91 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms