Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc6a20aQ8VDB9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc6a20aQ8VDB9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc6a20aQ8VDB9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc6a20aQ8VDB9 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc6a20aQ8VDB9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc6a20aQ8VDB9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Slc6a20aQ8VDB9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a20aQ8VDB9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a20aQ8VDB9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a20aQ8VDB9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a20aQ8VDB9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Slc6a20aQ8VDB9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a20aQ8VDB9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Slc6a20aQ8VDB9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a20aQ8VDB9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.07■□□□□ 0.8
Slc6a20aQ8VDB9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a20aQ8VDB9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a20aQ8VDB9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a20aQ8VDB9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.06■□□□□ 0.8
Slc6a20aQ8VDB9 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.06■□□□□ 0.8
Slc6a20aQ8VDB9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.06■□□□□ 0.8
Slc6a20aQ8VDB9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a20aQ8VDB9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a20aQ8VDB9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a20aQ8VDB9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a20aQ8VDB9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a20aQ8VDB9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.06■□□□□ 0.8
Slc6a20aQ8VDB9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a20aQ8VDB9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a20aQ8VDB9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a20aQ8VDB9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a20aQ8VDB9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.05■□□□□ 0.8
Slc6a20aQ8VDB9 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.05■□□□□ 0.8
Slc6a20aQ8VDB9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a20aQ8VDB9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Slc6a20aQ8VDB9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a20aQ8VDB9 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a20aQ8VDB9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a20aQ8VDB9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a20aQ8VDB9 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.04■□□□□ 0.8
Slc6a20aQ8VDB9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a20aQ8VDB9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a20aQ8VDB9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a20aQ8VDB9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a20aQ8VDB9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a20aQ8VDB9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc6a20aQ8VDB9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc6a20aQ8VDB9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc6a20aQ8VDB9 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Slc6a20aQ8VDB9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Slc6a20aQ8VDB9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.03■□□□□ 0.8
Slc6a20aQ8VDB9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Slc6a20aQ8VDB9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc6a20aQ8VDB9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc6a20aQ8VDB9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc6a20aQ8VDB9 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Slc6a20aQ8VDB9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Slc6a20aQ8VDB9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Slc6a20aQ8VDB9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Slc6a20aQ8VDB9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Slc6a20aQ8VDB9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Slc6a20aQ8VDB9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc6a20aQ8VDB9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc6a20aQ8VDB9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
Slc6a20aQ8VDB9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Slc6a20aQ8VDB9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Slc6a20aQ8VDB9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Slc6a20aQ8VDB9 Gm15546-201ENSMUST00000122095 826 ntBASIC20.01■□□□□ 0.79
Slc6a20aQ8VDB9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.01■□□□□ 0.79
Slc6a20aQ8VDB9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc6a20aQ8VDB9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Slc6a20aQ8VDB9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc6a20aQ8VDB9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Slc6a20aQ8VDB9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Slc6a20aQ8VDB9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc6a20aQ8VDB9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20■□□□□ 0.79
Slc6a20aQ8VDB9 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Slc6a20aQ8VDB9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc6a20aQ8VDB9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Slc6a20aQ8VDB9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc6a20aQ8VDB9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20■□□□□ 0.79
Slc6a20aQ8VDB9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Slc6a20aQ8VDB9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Slc6a20aQ8VDB9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc6a20aQ8VDB9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc6a20aQ8VDB9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc6a20aQ8VDB9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc6a20aQ8VDB9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc6a20aQ8VDB9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc6a20aQ8VDB9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc6a20aQ8VDB9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc6a20aQ8VDB9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc6a20aQ8VDB9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Slc6a20aQ8VDB9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.99■□□□□ 0.79
Slc6a20aQ8VDB9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc6a20aQ8VDB9 Gm7143-201ENSMUST00000222811 859 ntBASIC19.98■□□□□ 0.79
Slc6a20aQ8VDB9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.98■□□□□ 0.79
Slc6a20aQ8VDB9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc6a20aQ8VDB9 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms