Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chrna3Q8R4G9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chrna3Q8R4G9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.97■□□□□ 0.79
Chrna3Q8R4G9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chrna3Q8R4G9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chrna3Q8R4G9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Chrna3Q8R4G9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chrna3Q8R4G9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna3Q8R4G9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna3Q8R4G9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna3Q8R4G9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna3Q8R4G9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna3Q8R4G9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna3Q8R4G9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna3Q8R4G9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna3Q8R4G9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna3Q8R4G9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Chrna3Q8R4G9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna3Q8R4G9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Chrna3Q8R4G9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chrna3Q8R4G9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Chrna3Q8R4G9 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.95■□□□□ 0.78
Chrna3Q8R4G9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Chrna3Q8R4G9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chrna3Q8R4G9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chrna3Q8R4G9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chrna3Q8R4G9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chrna3Q8R4G9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Chrna3Q8R4G9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chrna3Q8R4G9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Chrna3Q8R4G9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chrna3Q8R4G9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chrna3Q8R4G9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.94■□□□□ 0.78
Chrna3Q8R4G9 Gm12821-201ENSMUST00000120022 600 ntBASIC19.94■□□□□ 0.78
Chrna3Q8R4G9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chrna3Q8R4G9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chrna3Q8R4G9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.94■□□□□ 0.78
Chrna3Q8R4G9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chrna3Q8R4G9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chrna3Q8R4G9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chrna3Q8R4G9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chrna3Q8R4G9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chrna3Q8R4G9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chrna3Q8R4G9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chrna3Q8R4G9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chrna3Q8R4G9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chrna3Q8R4G9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chrna3Q8R4G9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chrna3Q8R4G9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Chrna3Q8R4G9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chrna3Q8R4G9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.92■□□□□ 0.78
Chrna3Q8R4G9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.92■□□□□ 0.78
Chrna3Q8R4G9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chrna3Q8R4G9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chrna3Q8R4G9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Chrna3Q8R4G9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Chrna3Q8R4G9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Chrna3Q8R4G9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chrna3Q8R4G9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Chrna3Q8R4G9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chrna3Q8R4G9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chrna3Q8R4G9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Chrna3Q8R4G9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chrna3Q8R4G9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Chrna3Q8R4G9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.91■□□□□ 0.78
Chrna3Q8R4G9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chrna3Q8R4G9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chrna3Q8R4G9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chrna3Q8R4G9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
Chrna3Q8R4G9 Gm43530-201ENSMUST00000195920 274 ntBASIC19.9■□□□□ 0.78
Chrna3Q8R4G9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.9■□□□□ 0.78
Chrna3Q8R4G9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chrna3Q8R4G9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chrna3Q8R4G9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chrna3Q8R4G9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chrna3Q8R4G9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chrna3Q8R4G9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chrna3Q8R4G9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chrna3Q8R4G9 Gm15039-201ENSMUST00000118914 875 ntBASIC19.89■□□□□ 0.77
Chrna3Q8R4G9 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.89■□□□□ 0.77
Chrna3Q8R4G9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Chrna3Q8R4G9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.89■□□□□ 0.77
Chrna3Q8R4G9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Chrna3Q8R4G9 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.89■□□□□ 0.77
Chrna3Q8R4G9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Chrna3Q8R4G9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chrna3Q8R4G9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Chrna3Q8R4G9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chrna3Q8R4G9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chrna3Q8R4G9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.88■□□□□ 0.77
Chrna3Q8R4G9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chrna3Q8R4G9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chrna3Q8R4G9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chrna3Q8R4G9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chrna3Q8R4G9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chrna3Q8R4G9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chrna3Q8R4G9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chrna3Q8R4G9 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chrna3Q8R4G9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Chrna3Q8R4G9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms