Protein–RNA interactions for Protein: Q8R3K3

Ptcd2, Pentatricopeptide repeat-containing protein 2, mitochondrial, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd2Q8R3K3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ptcd2Q8R3K3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ptcd2Q8R3K3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptcd2Q8R3K3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptcd2Q8R3K3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptcd2Q8R3K3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptcd2Q8R3K3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Ptcd2Q8R3K3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ptcd2Q8R3K3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptcd2Q8R3K3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.73■■□□□ 1.07
Ptcd2Q8R3K3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptcd2Q8R3K3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptcd2Q8R3K3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ptcd2Q8R3K3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Ptcd2Q8R3K3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ptcd2Q8R3K3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ptcd2Q8R3K3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ptcd2Q8R3K3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ptcd2Q8R3K3 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Ptcd2Q8R3K3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ptcd2Q8R3K3 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ptcd2Q8R3K3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Ptcd2Q8R3K3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ptcd2Q8R3K3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ptcd2Q8R3K3 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.71■■□□□ 1.07
Ptcd2Q8R3K3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.7■■□□□ 1.06
Ptcd2Q8R3K3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.7■■□□□ 1.06
Ptcd2Q8R3K3 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.7■■□□□ 1.06
Ptcd2Q8R3K3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Ptcd2Q8R3K3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ptcd2Q8R3K3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ptcd2Q8R3K3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ptcd2Q8R3K3 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.69■■□□□ 1.06
Ptcd2Q8R3K3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.69■■□□□ 1.06
Ptcd2Q8R3K3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ptcd2Q8R3K3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ptcd2Q8R3K3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ptcd2Q8R3K3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ptcd2Q8R3K3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ptcd2Q8R3K3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ptcd2Q8R3K3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ptcd2Q8R3K3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ptcd2Q8R3K3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.68■■□□□ 1.06
Ptcd2Q8R3K3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
Ptcd2Q8R3K3 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.68■■□□□ 1.06
Ptcd2Q8R3K3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ptcd2Q8R3K3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ptcd2Q8R3K3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ptcd2Q8R3K3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ptcd2Q8R3K3 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ptcd2Q8R3K3 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.67■■□□□ 1.06
Ptcd2Q8R3K3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ptcd2Q8R3K3 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.67■■□□□ 1.06
Ptcd2Q8R3K3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
Ptcd2Q8R3K3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ptcd2Q8R3K3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ptcd2Q8R3K3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ptcd2Q8R3K3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ptcd2Q8R3K3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Ptcd2Q8R3K3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ptcd2Q8R3K3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.66■■□□□ 1.06
Ptcd2Q8R3K3 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ptcd2Q8R3K3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Ptcd2Q8R3K3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ptcd2Q8R3K3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Ptcd2Q8R3K3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ptcd2Q8R3K3 Gm20049-201ENSMUST00000219950 730 ntBASIC21.65■■□□□ 1.06
Ptcd2Q8R3K3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.65■■□□□ 1.06
Ptcd2Q8R3K3 Reep4-203ENSMUST00000226563 1444 ntBASIC21.64■■□□□ 1.06
Ptcd2Q8R3K3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ptcd2Q8R3K3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Ptcd2Q8R3K3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ptcd2Q8R3K3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ptcd2Q8R3K3 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ptcd2Q8R3K3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ptcd2Q8R3K3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ptcd2Q8R3K3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ptcd2Q8R3K3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ptcd2Q8R3K3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Ptcd2Q8R3K3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.63■■□□□ 1.05
Ptcd2Q8R3K3 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ptcd2Q8R3K3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Ptcd2Q8R3K3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.63■■□□□ 1.05
Ptcd2Q8R3K3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ptcd2Q8R3K3 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.62■■□□□ 1.05
Ptcd2Q8R3K3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.62■■□□□ 1.05
Ptcd2Q8R3K3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.62■■□□□ 1.05
Ptcd2Q8R3K3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.62■■□□□ 1.05
Ptcd2Q8R3K3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ptcd2Q8R3K3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ptcd2Q8R3K3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Ptcd2Q8R3K3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.61■■□□□ 1.05
Ptcd2Q8R3K3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Ptcd2Q8R3K3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.61■■□□□ 1.05
Ptcd2Q8R3K3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.61■■□□□ 1.05
Ptcd2Q8R3K3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ptcd2Q8R3K3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Ptcd2Q8R3K3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ptcd2Q8R3K3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ptcd2Q8R3K3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms