Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.24■□□□□ 0.83
Zcchc9Q8R1J3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Zcchc9Q8R1J3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Zcchc9Q8R1J3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Zcchc9Q8R1J3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.24■□□□□ 0.83
Zcchc9Q8R1J3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
Zcchc9Q8R1J3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Zcchc9Q8R1J3 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Zcchc9Q8R1J3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Zcchc9Q8R1J3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Zcchc9Q8R1J3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Zcchc9Q8R1J3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Zcchc9Q8R1J3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Zcchc9Q8R1J3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Zcchc9Q8R1J3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Zcchc9Q8R1J3 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.23■□□□□ 0.83
Zcchc9Q8R1J3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Zcchc9Q8R1J3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Zcchc9Q8R1J3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Zcchc9Q8R1J3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Zcchc9Q8R1J3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Zcchc9Q8R1J3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Zcchc9Q8R1J3 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.22■□□□□ 0.83
Zcchc9Q8R1J3 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.22■□□□□ 0.83
Zcchc9Q8R1J3 Gm8493-201ENSMUST00000196881 489 ntBASIC20.22■□□□□ 0.83
Zcchc9Q8R1J3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Zcchc9Q8R1J3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.22■□□□□ 0.83
Zcchc9Q8R1J3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.22■□□□□ 0.83
Zcchc9Q8R1J3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Zcchc9Q8R1J3 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Zcchc9Q8R1J3 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.21■□□□□ 0.83
Zcchc9Q8R1J3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Zcchc9Q8R1J3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Zcchc9Q8R1J3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Zcchc9Q8R1J3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.21■□□□□ 0.83
Zcchc9Q8R1J3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Zcchc9Q8R1J3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Zcchc9Q8R1J3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Zcchc9Q8R1J3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.21■□□□□ 0.83
Zcchc9Q8R1J3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
Zcchc9Q8R1J3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zcchc9Q8R1J3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zcchc9Q8R1J3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zcchc9Q8R1J3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zcchc9Q8R1J3 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.2■□□□□ 0.82
Zcchc9Q8R1J3 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Zcchc9Q8R1J3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zcchc9Q8R1J3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Zcchc9Q8R1J3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Zcchc9Q8R1J3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Zcchc9Q8R1J3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Zcchc9Q8R1J3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Zcchc9Q8R1J3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Zcchc9Q8R1J3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Zcchc9Q8R1J3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Zcchc9Q8R1J3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Zcchc9Q8R1J3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Zcchc9Q8R1J3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Zcchc9Q8R1J3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Zcchc9Q8R1J3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Zcchc9Q8R1J3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Zcchc9Q8R1J3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.18■□□□□ 0.82
Zcchc9Q8R1J3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.18■□□□□ 0.82
Zcchc9Q8R1J3 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Zcchc9Q8R1J3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Zcchc9Q8R1J3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Zcchc9Q8R1J3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Zcchc9Q8R1J3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.17■□□□□ 0.82
Zcchc9Q8R1J3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Zcchc9Q8R1J3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.17■□□□□ 0.82
Zcchc9Q8R1J3 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
Zcchc9Q8R1J3 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zcchc9Q8R1J3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zcchc9Q8R1J3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Zcchc9Q8R1J3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
Zcchc9Q8R1J3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Zcchc9Q8R1J3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zcchc9Q8R1J3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.17■□□□□ 0.82
Zcchc9Q8R1J3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Zcchc9Q8R1J3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zcchc9Q8R1J3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zcchc9Q8R1J3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zcchc9Q8R1J3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zcchc9Q8R1J3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zcchc9Q8R1J3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Zcchc9Q8R1J3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Zcchc9Q8R1J3 Gm7143-201ENSMUST00000222811 859 ntBASIC20.16■□□□□ 0.82
Zcchc9Q8R1J3 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.16■□□□□ 0.82
Zcchc9Q8R1J3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zcchc9Q8R1J3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Zcchc9Q8R1J3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Zcchc9Q8R1J3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zcchc9Q8R1J3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zcchc9Q8R1J3 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zcchc9Q8R1J3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Zcchc9Q8R1J3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Zcchc9Q8R1J3 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Zcchc9Q8R1J3 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Zcchc9Q8R1J3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Zcchc9Q8R1J3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms