Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmgcll1Q8JZS7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.05■□□□□ 0.96
Hmgcll1Q8JZS7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
Hmgcll1Q8JZS7 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hmgcll1Q8JZS7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.05■□□□□ 0.96
Hmgcll1Q8JZS7 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hmgcll1Q8JZS7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hmgcll1Q8JZS7 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hmgcll1Q8JZS7 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hmgcll1Q8JZS7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hmgcll1Q8JZS7 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmgcll1Q8JZS7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmgcll1Q8JZS7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmgcll1Q8JZS7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmgcll1Q8JZS7 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.04■□□□□ 0.96
Hmgcll1Q8JZS7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.04■□□□□ 0.96
Hmgcll1Q8JZS7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.04■□□□□ 0.96
Hmgcll1Q8JZS7 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.04■□□□□ 0.96
Hmgcll1Q8JZS7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
Hmgcll1Q8JZS7 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.04■□□□□ 0.96
Hmgcll1Q8JZS7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmgcll1Q8JZS7 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Hmgcll1Q8JZS7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmgcll1Q8JZS7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmgcll1Q8JZS7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmgcll1Q8JZS7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmgcll1Q8JZS7 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.03■□□□□ 0.96
Hmgcll1Q8JZS7 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hmgcll1Q8JZS7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Hmgcll1Q8JZS7 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hmgcll1Q8JZS7 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hmgcll1Q8JZS7 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.03■□□□□ 0.96
Hmgcll1Q8JZS7 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.03■□□□□ 0.96
Hmgcll1Q8JZS7 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hmgcll1Q8JZS7 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hmgcll1Q8JZS7 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
Hmgcll1Q8JZS7 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hmgcll1Q8JZS7 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hmgcll1Q8JZS7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Hmgcll1Q8JZS7 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hmgcll1Q8JZS7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Hmgcll1Q8JZS7 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Hmgcll1Q8JZS7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Hmgcll1Q8JZS7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hmgcll1Q8JZS7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
Hmgcll1Q8JZS7 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Hmgcll1Q8JZS7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Hmgcll1Q8JZS7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.01■□□□□ 0.95
Hmgcll1Q8JZS7 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Hmgcll1Q8JZS7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmgcll1Q8JZS7 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmgcll1Q8JZS7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmgcll1Q8JZS7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Hmgcll1Q8JZS7 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmgcll1Q8JZS7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmgcll1Q8JZS7 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21■□□□□ 0.95
Hmgcll1Q8JZS7 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hmgcll1Q8JZS7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21■□□□□ 0.95
Hmgcll1Q8JZS7 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hmgcll1Q8JZS7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21■□□□□ 0.95
Hmgcll1Q8JZS7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hmgcll1Q8JZS7 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Hmgcll1Q8JZS7 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hmgcll1Q8JZS7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hmgcll1Q8JZS7 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Hmgcll1Q8JZS7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgcll1Q8JZS7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Hmgcll1Q8JZS7 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgcll1Q8JZS7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgcll1Q8JZS7 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgcll1Q8JZS7 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgcll1Q8JZS7 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Hmgcll1Q8JZS7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmgcll1Q8JZS7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
Hmgcll1Q8JZS7 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmgcll1Q8JZS7 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmgcll1Q8JZS7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.98■□□□□ 0.95
Hmgcll1Q8JZS7 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hmgcll1Q8JZS7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.98■□□□□ 0.95
Hmgcll1Q8JZS7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmgcll1Q8JZS7 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hmgcll1Q8JZS7 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmgcll1Q8JZS7 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgcll1Q8JZS7 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Hmgcll1Q8JZS7 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgcll1Q8JZS7 Gm12251-201ENSMUST00000117893 792 ntBASIC20.97■□□□□ 0.95
Hmgcll1Q8JZS7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgcll1Q8JZS7 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgcll1Q8JZS7 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Hmgcll1Q8JZS7 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Hmgcll1Q8JZS7 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.97■□□□□ 0.95
Hmgcll1Q8JZS7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.97■□□□□ 0.95
Hmgcll1Q8JZS7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgcll1Q8JZS7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgcll1Q8JZS7 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgcll1Q8JZS7 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgcll1Q8JZS7 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgcll1Q8JZS7 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgcll1Q8JZS7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgcll1Q8JZS7 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms