Protein–RNA interactions for Protein: Q8CII9

Crlf2, Cytokine receptor-like factor 2, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf2Q8CII9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Crlf2Q8CII9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Crlf2Q8CII9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Crlf2Q8CII9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Crlf2Q8CII9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC22.07■■□□□ 1.12
Crlf2Q8CII9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC22.07■■□□□ 1.12
Crlf2Q8CII9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC22.07■■□□□ 1.12
Crlf2Q8CII9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Crlf2Q8CII9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Crlf2Q8CII9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Crlf2Q8CII9 Ap3s1-204ENSMUST00000225520 957 ntBASIC22.06■■□□□ 1.12
Crlf2Q8CII9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Crlf2Q8CII9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Crlf2Q8CII9 Gm42555-201ENSMUST00000199304 1039 ntBASIC22.05■■□□□ 1.12
Crlf2Q8CII9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC22.05■■□□□ 1.12
Crlf2Q8CII9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
Crlf2Q8CII9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
Crlf2Q8CII9 Reep4-203ENSMUST00000226563 1444 ntBASIC22.05■■□□□ 1.12
Crlf2Q8CII9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Crlf2Q8CII9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Crlf2Q8CII9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Crlf2Q8CII9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Crlf2Q8CII9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Crlf2Q8CII9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Crlf2Q8CII9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
Crlf2Q8CII9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC22.04■■□□□ 1.12
Crlf2Q8CII9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC22.04■■□□□ 1.12
Crlf2Q8CII9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Crlf2Q8CII9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Crlf2Q8CII9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Crlf2Q8CII9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Crlf2Q8CII9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Crlf2Q8CII9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Crlf2Q8CII9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Crlf2Q8CII9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Crlf2Q8CII9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Crlf2Q8CII9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Crlf2Q8CII9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC22.02■■□□□ 1.12
Crlf2Q8CII9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC22.02■■□□□ 1.12
Crlf2Q8CII9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Crlf2Q8CII9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
Crlf2Q8CII9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Crlf2Q8CII9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Crlf2Q8CII9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Crlf2Q8CII9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Crlf2Q8CII9 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Crlf2Q8CII9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
Crlf2Q8CII9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Crlf2Q8CII9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Crlf2Q8CII9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Crlf2Q8CII9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Crlf2Q8CII9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Crlf2Q8CII9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Crlf2Q8CII9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC22■■□□□ 1.11
Crlf2Q8CII9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC22■■□□□ 1.11
Crlf2Q8CII9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC22■■□□□ 1.11
Crlf2Q8CII9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC22■■□□□ 1.11
Crlf2Q8CII9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22■■□□□ 1.11
Crlf2Q8CII9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Crlf2Q8CII9 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Crlf2Q8CII9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22■■□□□ 1.11
Crlf2Q8CII9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Crlf2Q8CII9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Crlf2Q8CII9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.99■■□□□ 1.11
Crlf2Q8CII9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Crlf2Q8CII9 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.99■■□□□ 1.11
Crlf2Q8CII9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Crlf2Q8CII9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Crlf2Q8CII9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
Crlf2Q8CII9 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Crlf2Q8CII9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Crlf2Q8CII9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Crlf2Q8CII9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Crlf2Q8CII9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Crlf2Q8CII9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Crlf2Q8CII9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.97■■□□□ 1.11
Crlf2Q8CII9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Crlf2Q8CII9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.97■■□□□ 1.11
Crlf2Q8CII9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
Crlf2Q8CII9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Crlf2Q8CII9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Crlf2Q8CII9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Crlf2Q8CII9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Crlf2Q8CII9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
Crlf2Q8CII9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.96■■□□□ 1.11
Crlf2Q8CII9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Crlf2Q8CII9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Crlf2Q8CII9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Crlf2Q8CII9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Crlf2Q8CII9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Crlf2Q8CII9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Crlf2Q8CII9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Crlf2Q8CII9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Crlf2Q8CII9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Crlf2Q8CII9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Crlf2Q8CII9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Crlf2Q8CII9 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.95■■□□□ 1.1
Crlf2Q8CII9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Crlf2Q8CII9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.95■■□□□ 1.1
Crlf2Q8CII9 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.95■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms