Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.65■□□□□ 0.9
CopaQ8CIE6 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CopaQ8CIE6 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CopaQ8CIE6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
CopaQ8CIE6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CopaQ8CIE6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CopaQ8CIE6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CopaQ8CIE6 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CopaQ8CIE6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CopaQ8CIE6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CopaQ8CIE6 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CopaQ8CIE6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CopaQ8CIE6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CopaQ8CIE6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CopaQ8CIE6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.63■□□□□ 0.89
CopaQ8CIE6 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CopaQ8CIE6 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.63■□□□□ 0.89
CopaQ8CIE6 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CopaQ8CIE6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CopaQ8CIE6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CopaQ8CIE6 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CopaQ8CIE6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CopaQ8CIE6 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CopaQ8CIE6 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.62■□□□□ 0.89
CopaQ8CIE6 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CopaQ8CIE6 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CopaQ8CIE6 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CopaQ8CIE6 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.62■□□□□ 0.89
CopaQ8CIE6 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.62■□□□□ 0.89
CopaQ8CIE6 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.62■□□□□ 0.89
CopaQ8CIE6 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CopaQ8CIE6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CopaQ8CIE6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
CopaQ8CIE6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CopaQ8CIE6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
CopaQ8CIE6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.61■□□□□ 0.89
CopaQ8CIE6 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CopaQ8CIE6 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CopaQ8CIE6 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.61■□□□□ 0.89
CopaQ8CIE6 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.61■□□□□ 0.89
CopaQ8CIE6 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CopaQ8CIE6 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CopaQ8CIE6 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.61■□□□□ 0.89
CopaQ8CIE6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CopaQ8CIE6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CopaQ8CIE6 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CopaQ8CIE6 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.6■□□□□ 0.89
CopaQ8CIE6 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.6■□□□□ 0.89
CopaQ8CIE6 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CopaQ8CIE6 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.59■□□□□ 0.89
CopaQ8CIE6 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.59■□□□□ 0.89
CopaQ8CIE6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.59■□□□□ 0.89
CopaQ8CIE6 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.59■□□□□ 0.89
CopaQ8CIE6 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CopaQ8CIE6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CopaQ8CIE6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CopaQ8CIE6 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CopaQ8CIE6 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CopaQ8CIE6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CopaQ8CIE6 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CopaQ8CIE6 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CopaQ8CIE6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CopaQ8CIE6 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CopaQ8CIE6 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CopaQ8CIE6 Golgb1-201ENSMUST00000023534 498 ntBASIC20.58■□□□□ 0.89
CopaQ8CIE6 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CopaQ8CIE6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CopaQ8CIE6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CopaQ8CIE6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CopaQ8CIE6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CopaQ8CIE6 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CopaQ8CIE6 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CopaQ8CIE6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CopaQ8CIE6 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CopaQ8CIE6 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CopaQ8CIE6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CopaQ8CIE6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CopaQ8CIE6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CopaQ8CIE6 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CopaQ8CIE6 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CopaQ8CIE6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.56■□□□□ 0.88
CopaQ8CIE6 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.56■□□□□ 0.88
CopaQ8CIE6 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CopaQ8CIE6 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CopaQ8CIE6 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CopaQ8CIE6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.56■□□□□ 0.88
CopaQ8CIE6 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CopaQ8CIE6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CopaQ8CIE6 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CopaQ8CIE6 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CopaQ8CIE6 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CopaQ8CIE6 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.55■□□□□ 0.88
CopaQ8CIE6 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CopaQ8CIE6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CopaQ8CIE6 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CopaQ8CIE6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.54■□□□□ 0.88
CopaQ8CIE6 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CopaQ8CIE6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CopaQ8CIE6 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CopaQ8CIE6 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms