Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Rftn2Q8CHX7 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rftn2Q8CHX7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.71■■□□□ 1.07
Rftn2Q8CHX7 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rftn2Q8CHX7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rftn2Q8CHX7 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rftn2Q8CHX7 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rftn2Q8CHX7 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.71■■□□□ 1.07
Rftn2Q8CHX7 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rftn2Q8CHX7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rftn2Q8CHX7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.71■■□□□ 1.07
Rftn2Q8CHX7 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rftn2Q8CHX7 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.7■■□□□ 1.07
Rftn2Q8CHX7 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rftn2Q8CHX7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.7■■□□□ 1.06
Rftn2Q8CHX7 Gm8493-201ENSMUST00000196881 489 ntBASIC21.7■■□□□ 1.06
Rftn2Q8CHX7 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rftn2Q8CHX7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rftn2Q8CHX7 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rftn2Q8CHX7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rftn2Q8CHX7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Rftn2Q8CHX7 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rftn2Q8CHX7 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rftn2Q8CHX7 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rftn2Q8CHX7 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rftn2Q8CHX7 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rftn2Q8CHX7 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.69■■□□□ 1.06
Rftn2Q8CHX7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rftn2Q8CHX7 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rftn2Q8CHX7 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rftn2Q8CHX7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
Rftn2Q8CHX7 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.68■■□□□ 1.06
Rftn2Q8CHX7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rftn2Q8CHX7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rftn2Q8CHX7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rftn2Q8CHX7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.68■■□□□ 1.06
Rftn2Q8CHX7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rftn2Q8CHX7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rftn2Q8CHX7 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.67■■□□□ 1.06
Rftn2Q8CHX7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rftn2Q8CHX7 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rftn2Q8CHX7 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rftn2Q8CHX7 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rftn2Q8CHX7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rftn2Q8CHX7 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rftn2Q8CHX7 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rftn2Q8CHX7 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rftn2Q8CHX7 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
Rftn2Q8CHX7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rftn2Q8CHX7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rftn2Q8CHX7 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.66■■□□□ 1.06
Rftn2Q8CHX7 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rftn2Q8CHX7 Spcs1-204ENSMUST00000226782 949 ntBASIC21.66■■□□□ 1.06
Rftn2Q8CHX7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rftn2Q8CHX7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Rftn2Q8CHX7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rftn2Q8CHX7 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.65■■□□□ 1.06
Rftn2Q8CHX7 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Rftn2Q8CHX7 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rftn2Q8CHX7 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rftn2Q8CHX7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.65■■□□□ 1.06
Rftn2Q8CHX7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rftn2Q8CHX7 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Rftn2Q8CHX7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Rftn2Q8CHX7 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.64■■□□□ 1.06
Rftn2Q8CHX7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rftn2Q8CHX7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Rftn2Q8CHX7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rftn2Q8CHX7 Gm12251-201ENSMUST00000117893 792 ntBASIC21.64■■□□□ 1.05
Rftn2Q8CHX7 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rftn2Q8CHX7 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rftn2Q8CHX7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rftn2Q8CHX7 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.64■■□□□ 1.05
Rftn2Q8CHX7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rftn2Q8CHX7 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rftn2Q8CHX7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rftn2Q8CHX7 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rftn2Q8CHX7 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rftn2Q8CHX7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rftn2Q8CHX7 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rftn2Q8CHX7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rftn2Q8CHX7 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.63■■□□□ 1.05
Rftn2Q8CHX7 Mir6236-201ENSMUST00000184437 123 ntBASIC21.63■■□□□ 1.05
Rftn2Q8CHX7 Gm43173-201ENSMUST00000202246 593 ntBASIC21.63■■□□□ 1.05
Rftn2Q8CHX7 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rftn2Q8CHX7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rftn2Q8CHX7 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rftn2Q8CHX7 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Rftn2Q8CHX7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rftn2Q8CHX7 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rftn2Q8CHX7 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rftn2Q8CHX7 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Rftn2Q8CHX7 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rftn2Q8CHX7 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.62■■□□□ 1.05
Rftn2Q8CHX7 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rftn2Q8CHX7 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.62■■□□□ 1.05
Rftn2Q8CHX7 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rftn2Q8CHX7 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.62■■□□□ 1.05
Rftn2Q8CHX7 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.62■■□□□ 1.05
Rftn2Q8CHX7 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms