Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Rab11fip3Q8CHD8 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Rab11fip3Q8CHD8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
Rab11fip3Q8CHD8 Dmtn-209ENSMUST00000228295 2572 ntBASIC26.46■■□□□ 1.83
Rab11fip3Q8CHD8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Rab11fip3Q8CHD8 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Rab11fip3Q8CHD8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Rab11fip3Q8CHD8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Rab11fip3Q8CHD8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
Rab11fip3Q8CHD8 Gm43017-201ENSMUST00000198296 752 ntBASIC26.45■■□□□ 1.82
Rab11fip3Q8CHD8 Gm43173-201ENSMUST00000202246 593 ntBASIC26.45■■□□□ 1.82
Rab11fip3Q8CHD8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Rab11fip3Q8CHD8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
Rab11fip3Q8CHD8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
Rab11fip3Q8CHD8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Rab11fip3Q8CHD8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
Rab11fip3Q8CHD8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Rab11fip3Q8CHD8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Rab11fip3Q8CHD8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Rab11fip3Q8CHD8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Rab11fip3Q8CHD8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC26.43■■□□□ 1.82
Rab11fip3Q8CHD8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Rab11fip3Q8CHD8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Rab11fip3Q8CHD8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Rab11fip3Q8CHD8 Gm6085-201ENSMUST00000182774 1470 ntBASIC26.42■■□□□ 1.82
Rab11fip3Q8CHD8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Rab11fip3Q8CHD8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Rab11fip3Q8CHD8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC26.42■■□□□ 1.82
Rab11fip3Q8CHD8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Rab11fip3Q8CHD8 Gm12251-201ENSMUST00000117893 792 ntBASIC26.42■■□□□ 1.82
Rab11fip3Q8CHD8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC26.42■■□□□ 1.82
Rab11fip3Q8CHD8 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Rab11fip3Q8CHD8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
Rab11fip3Q8CHD8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Rab11fip3Q8CHD8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Rab11fip3Q8CHD8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Rab11fip3Q8CHD8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Rab11fip3Q8CHD8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC26.41■■□□□ 1.82
Rab11fip3Q8CHD8 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Rab11fip3Q8CHD8 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
Rab11fip3Q8CHD8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Rab11fip3Q8CHD8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Rab11fip3Q8CHD8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Rab11fip3Q8CHD8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Rab11fip3Q8CHD8 Gm27045-201ENSMUST00000182145 1402 ntBASIC26.39■■□□□ 1.82
Rab11fip3Q8CHD8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Rab11fip3Q8CHD8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Rab11fip3Q8CHD8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
Rab11fip3Q8CHD8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.81
Rab11fip3Q8CHD8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Rab11fip3Q8CHD8 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.81
Rab11fip3Q8CHD8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.81
Rab11fip3Q8CHD8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC26.38■■□□□ 1.81
Rab11fip3Q8CHD8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rab11fip3Q8CHD8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rab11fip3Q8CHD8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rab11fip3Q8CHD8 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rab11fip3Q8CHD8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Rab11fip3Q8CHD8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rab11fip3Q8CHD8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Rab11fip3Q8CHD8 Gm10209-201ENSMUST00000203397 1607 ntBASIC26.37■■□□□ 1.81
Rab11fip3Q8CHD8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rab11fip3Q8CHD8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Rab11fip3Q8CHD8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rab11fip3Q8CHD8 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rab11fip3Q8CHD8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rab11fip3Q8CHD8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC26.36■■□□□ 1.81
Rab11fip3Q8CHD8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
Rab11fip3Q8CHD8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Rab11fip3Q8CHD8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rab11fip3Q8CHD8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rab11fip3Q8CHD8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rab11fip3Q8CHD8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rab11fip3Q8CHD8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rab11fip3Q8CHD8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Rab11fip3Q8CHD8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rab11fip3Q8CHD8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rab11fip3Q8CHD8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rab11fip3Q8CHD8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC26.35■■□□□ 1.81
Rab11fip3Q8CHD8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rab11fip3Q8CHD8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
Rab11fip3Q8CHD8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC26.35■■□□□ 1.81
Rab11fip3Q8CHD8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC26.35■■□□□ 1.81
Rab11fip3Q8CHD8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC26.35■■□□□ 1.81
Rab11fip3Q8CHD8 Mir6236-201ENSMUST00000184437 123 ntBASIC26.35■■□□□ 1.81
Rab11fip3Q8CHD8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rab11fip3Q8CHD8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rab11fip3Q8CHD8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rab11fip3Q8CHD8 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rab11fip3Q8CHD8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rab11fip3Q8CHD8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Rab11fip3Q8CHD8 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rab11fip3Q8CHD8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC26.34■■□□□ 1.81
Rab11fip3Q8CHD8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC26.34■■□□□ 1.81
Rab11fip3Q8CHD8 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC26.34■■□□□ 1.81
Rab11fip3Q8CHD8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rab11fip3Q8CHD8 Gm32051-202ENSMUST00000197905 2385 ntBASIC26.34■■□□□ 1.81
Rab11fip3Q8CHD8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rab11fip3Q8CHD8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rab11fip3Q8CHD8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms