Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ShfQ8CG80 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ShfQ8CG80 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ShfQ8CG80 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ShfQ8CG80 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ShfQ8CG80 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ShfQ8CG80 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ShfQ8CG80 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ShfQ8CG80 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
ShfQ8CG80 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.19■□□□□ 0.5
ShfQ8CG80 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ShfQ8CG80 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ShfQ8CG80 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.18■□□□□ 0.5
ShfQ8CG80 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ShfQ8CG80 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.18■□□□□ 0.5
ShfQ8CG80 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ShfQ8CG80 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ShfQ8CG80 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ShfQ8CG80 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.17■□□□□ 0.5
ShfQ8CG80 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ShfQ8CG80 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ShfQ8CG80 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ShfQ8CG80 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
ShfQ8CG80 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ShfQ8CG80 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ShfQ8CG80 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.17■□□□□ 0.5
ShfQ8CG80 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ShfQ8CG80 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.17■□□□□ 0.5
ShfQ8CG80 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ShfQ8CG80 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ShfQ8CG80 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ShfQ8CG80 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.16■□□□□ 0.5
ShfQ8CG80 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.16■□□□□ 0.5
ShfQ8CG80 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ShfQ8CG80 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ShfQ8CG80 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ShfQ8CG80 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ShfQ8CG80 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ShfQ8CG80 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ShfQ8CG80 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ShfQ8CG80 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ShfQ8CG80 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ShfQ8CG80 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ShfQ8CG80 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ShfQ8CG80 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ShfQ8CG80 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
ShfQ8CG80 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ShfQ8CG80 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ShfQ8CG80 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ShfQ8CG80 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.15■□□□□ 0.5
ShfQ8CG80 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.15■□□□□ 0.5
ShfQ8CG80 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ShfQ8CG80 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ShfQ8CG80 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ShfQ8CG80 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ShfQ8CG80 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ShfQ8CG80 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ShfQ8CG80 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
ShfQ8CG80 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ShfQ8CG80 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
ShfQ8CG80 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
ShfQ8CG80 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
ShfQ8CG80 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ShfQ8CG80 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.13■□□□□ 0.49
ShfQ8CG80 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.13■□□□□ 0.49
ShfQ8CG80 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.13■□□□□ 0.49
ShfQ8CG80 Gm43566-201ENSMUST00000196851 808 ntBASIC18.13■□□□□ 0.49
ShfQ8CG80 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ShfQ8CG80 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
ShfQ8CG80 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
ShfQ8CG80 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ShfQ8CG80 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ShfQ8CG80 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ShfQ8CG80 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ShfQ8CG80 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ShfQ8CG80 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ShfQ8CG80 Gm10399-202ENSMUST00000202768 748 ntBASIC18.12■□□□□ 0.49
ShfQ8CG80 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ShfQ8CG80 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ShfQ8CG80 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ShfQ8CG80 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.11■□□□□ 0.49
ShfQ8CG80 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ShfQ8CG80 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ShfQ8CG80 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ShfQ8CG80 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ShfQ8CG80 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ShfQ8CG80 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ShfQ8CG80 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ShfQ8CG80 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ShfQ8CG80 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ShfQ8CG80 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ShfQ8CG80 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ShfQ8CG80 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.1■□□□□ 0.49
ShfQ8CG80 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ShfQ8CG80 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
ShfQ8CG80 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ShfQ8CG80 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ShfQ8CG80 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
ShfQ8CG80 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
ShfQ8CG80 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms