Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Pabpn1Q8CCS6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Pabpn1Q8CCS6 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Pabpn1Q8CCS6 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC32.52■■■□□ 2.8
Pabpn1Q8CCS6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
Pabpn1Q8CCS6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC32.52■■■□□ 2.8
Pabpn1Q8CCS6 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Pabpn1Q8CCS6 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC32.51■■■□□ 2.79
Pabpn1Q8CCS6 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC32.51■■■□□ 2.79
Pabpn1Q8CCS6 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC32.51■■■□□ 2.79
Pabpn1Q8CCS6 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
Pabpn1Q8CCS6 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC32.51■■■□□ 2.79
Pabpn1Q8CCS6 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Pabpn1Q8CCS6 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.79
Pabpn1Q8CCS6 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.79
Pabpn1Q8CCS6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC32.5■■■□□ 2.79
Pabpn1Q8CCS6 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC32.5■■■□□ 2.79
Pabpn1Q8CCS6 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Pabpn1Q8CCS6 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Pabpn1Q8CCS6 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Pabpn1Q8CCS6 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC32.49■■■□□ 2.79
Pabpn1Q8CCS6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Pabpn1Q8CCS6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
Pabpn1Q8CCS6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Pabpn1Q8CCS6 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Pabpn1Q8CCS6 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Pabpn1Q8CCS6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC32.48■■■□□ 2.79
Pabpn1Q8CCS6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Pabpn1Q8CCS6 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC32.46■■■□□ 2.79
Pabpn1Q8CCS6 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Pabpn1Q8CCS6 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC32.46■■■□□ 2.79
Pabpn1Q8CCS6 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC32.46■■■□□ 2.79
Pabpn1Q8CCS6 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Pabpn1Q8CCS6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC32.46■■■□□ 2.79
Pabpn1Q8CCS6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC32.45■■■□□ 2.79
Pabpn1Q8CCS6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC32.45■■■□□ 2.79
Pabpn1Q8CCS6 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC32.45■■■□□ 2.79
Pabpn1Q8CCS6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
Pabpn1Q8CCS6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC32.45■■■□□ 2.79
Pabpn1Q8CCS6 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Pabpn1Q8CCS6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC32.45■■■□□ 2.78
Pabpn1Q8CCS6 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC32.45■■■□□ 2.78
Pabpn1Q8CCS6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Pabpn1Q8CCS6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC32.44■■■□□ 2.78
Pabpn1Q8CCS6 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC32.44■■■□□ 2.78
Pabpn1Q8CCS6 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Pabpn1Q8CCS6 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC32.44■■■□□ 2.78
Pabpn1Q8CCS6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Pabpn1Q8CCS6 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC32.43■■■□□ 2.78
Pabpn1Q8CCS6 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC32.43■■■□□ 2.78
Pabpn1Q8CCS6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC32.43■■■□□ 2.78
Pabpn1Q8CCS6 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Pabpn1Q8CCS6 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC32.42■■■□□ 2.78
Pabpn1Q8CCS6 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC32.42■■■□□ 2.78
Pabpn1Q8CCS6 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Pabpn1Q8CCS6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Pabpn1Q8CCS6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Pabpn1Q8CCS6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC32.41■■■□□ 2.78
Pabpn1Q8CCS6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Pabpn1Q8CCS6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Pabpn1Q8CCS6 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC32.4■■■□□ 2.78
Pabpn1Q8CCS6 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC32.4■■■□□ 2.78
Pabpn1Q8CCS6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Pabpn1Q8CCS6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
Pabpn1Q8CCS6 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Pabpn1Q8CCS6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC32.39■■■□□ 2.78
Pabpn1Q8CCS6 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC32.39■■■□□ 2.78
Pabpn1Q8CCS6 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC32.39■■■□□ 2.78
Pabpn1Q8CCS6 Gm44878-201ENSMUST00000205812 1295 ntBASIC32.39■■■□□ 2.78
Pabpn1Q8CCS6 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
Pabpn1Q8CCS6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
Pabpn1Q8CCS6 Krtap5-1-202ENSMUST00000188274 742 ntBASIC32.38■■■□□ 2.77
Pabpn1Q8CCS6 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC32.38■■■□□ 2.77
Pabpn1Q8CCS6 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Pabpn1Q8CCS6 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
Pabpn1Q8CCS6 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Pabpn1Q8CCS6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Pabpn1Q8CCS6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC32.38■■■□□ 2.77
Pabpn1Q8CCS6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Pabpn1Q8CCS6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Pabpn1Q8CCS6 Gm7290-201ENSMUST00000104990 617 ntBASIC32.37■■■□□ 2.77
Pabpn1Q8CCS6 Gm12918-201ENSMUST00000120234 636 ntBASIC32.37■■■□□ 2.77
Pabpn1Q8CCS6 Gm15710-201ENSMUST00000121821 636 ntBASIC32.37■■■□□ 2.77
Pabpn1Q8CCS6 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
Pabpn1Q8CCS6 Gm5075-201ENSMUST00000196916 622 ntBASIC32.37■■■□□ 2.77
Pabpn1Q8CCS6 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
Pabpn1Q8CCS6 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC32.37■■■□□ 2.77
Pabpn1Q8CCS6 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC32.37■■■□□ 2.77
Pabpn1Q8CCS6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Pabpn1Q8CCS6 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Pabpn1Q8CCS6 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC32.36■■■□□ 2.77
Pabpn1Q8CCS6 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC32.36■■■□□ 2.77
Pabpn1Q8CCS6 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
Pabpn1Q8CCS6 Trmt13-210ENSMUST00000198454 880 ntBASIC32.36■■■□□ 2.77
Pabpn1Q8CCS6 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Pabpn1Q8CCS6 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Pabpn1Q8CCS6 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Pabpn1Q8CCS6 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC32.35■■■□□ 2.77
Pabpn1Q8CCS6 Gm27045-201ENSMUST00000182145 1402 ntBASIC32.34■■■□□ 2.77
Pabpn1Q8CCS6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC32.34■■■□□ 2.77
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms