Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Aph1bQ8C7N7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Aph1bQ8C7N7 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Aph1bQ8C7N7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.23■□□□□ 0.83
Aph1bQ8C7N7 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.23■□□□□ 0.83
Aph1bQ8C7N7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Aph1bQ8C7N7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Aph1bQ8C7N7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Aph1bQ8C7N7 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Aph1bQ8C7N7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.22■□□□□ 0.83
Aph1bQ8C7N7 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Aph1bQ8C7N7 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Aph1bQ8C7N7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.22■□□□□ 0.83
Aph1bQ8C7N7 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Aph1bQ8C7N7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Aph1bQ8C7N7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.21■□□□□ 0.83
Aph1bQ8C7N7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Aph1bQ8C7N7 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Aph1bQ8C7N7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Aph1bQ8C7N7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Aph1bQ8C7N7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Aph1bQ8C7N7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.2■□□□□ 0.82
Aph1bQ8C7N7 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Aph1bQ8C7N7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Aph1bQ8C7N7 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Aph1bQ8C7N7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Aph1bQ8C7N7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Aph1bQ8C7N7 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Aph1bQ8C7N7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Aph1bQ8C7N7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Aph1bQ8C7N7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Aph1bQ8C7N7 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Aph1bQ8C7N7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Aph1bQ8C7N7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Aph1bQ8C7N7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Aph1bQ8C7N7 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Aph1bQ8C7N7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Aph1bQ8C7N7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Aph1bQ8C7N7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Aph1bQ8C7N7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Aph1bQ8C7N7 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Aph1bQ8C7N7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Aph1bQ8C7N7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Aph1bQ8C7N7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Aph1bQ8C7N7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Aph1bQ8C7N7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.17■□□□□ 0.82
Aph1bQ8C7N7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Aph1bQ8C7N7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Aph1bQ8C7N7 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Aph1bQ8C7N7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.17■□□□□ 0.82
Aph1bQ8C7N7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Aph1bQ8C7N7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Aph1bQ8C7N7 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Aph1bQ8C7N7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.16■□□□□ 0.82
Aph1bQ8C7N7 Gm10399-202ENSMUST00000202768 748 ntBASIC20.16■□□□□ 0.82
Aph1bQ8C7N7 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.16■□□□□ 0.82
Aph1bQ8C7N7 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Aph1bQ8C7N7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Aph1bQ8C7N7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Aph1bQ8C7N7 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Aph1bQ8C7N7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Aph1bQ8C7N7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Aph1bQ8C7N7 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Aph1bQ8C7N7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Aph1bQ8C7N7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Aph1bQ8C7N7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Aph1bQ8C7N7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Aph1bQ8C7N7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.82
Aph1bQ8C7N7 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Aph1bQ8C7N7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Aph1bQ8C7N7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Aph1bQ8C7N7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Aph1bQ8C7N7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Aph1bQ8C7N7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Aph1bQ8C7N7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Aph1bQ8C7N7 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Aph1bQ8C7N7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Aph1bQ8C7N7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Aph1bQ8C7N7 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Aph1bQ8C7N7 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Aph1bQ8C7N7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Aph1bQ8C7N7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Aph1bQ8C7N7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Aph1bQ8C7N7 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Aph1bQ8C7N7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Aph1bQ8C7N7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Aph1bQ8C7N7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Aph1bQ8C7N7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Aph1bQ8C7N7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Aph1bQ8C7N7 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.12■□□□□ 0.81
Aph1bQ8C7N7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Aph1bQ8C7N7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Aph1bQ8C7N7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Aph1bQ8C7N7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Aph1bQ8C7N7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Aph1bQ8C7N7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Aph1bQ8C7N7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Aph1bQ8C7N7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Aph1bQ8C7N7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.11■□□□□ 0.81
Aph1bQ8C7N7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms