Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rft1Q8C3B8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rft1Q8C3B8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rft1Q8C3B8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
Rft1Q8C3B8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rft1Q8C3B8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.98■□□□□ 0.47
Rft1Q8C3B8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rft1Q8C3B8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rft1Q8C3B8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Rft1Q8C3B8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rft1Q8C3B8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rft1Q8C3B8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.98■□□□□ 0.47
Rft1Q8C3B8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Rft1Q8C3B8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rft1Q8C3B8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rft1Q8C3B8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Rft1Q8C3B8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rft1Q8C3B8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rft1Q8C3B8 Gm15820-201ENSMUST00000201566 728 ntBASIC17.97■□□□□ 0.47
Rft1Q8C3B8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Rft1Q8C3B8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rft1Q8C3B8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rft1Q8C3B8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rft1Q8C3B8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rft1Q8C3B8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rft1Q8C3B8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rft1Q8C3B8 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.96■□□□□ 0.47
Rft1Q8C3B8 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rft1Q8C3B8 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.96■□□□□ 0.47
Rft1Q8C3B8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rft1Q8C3B8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.96■□□□□ 0.47
Rft1Q8C3B8 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rft1Q8C3B8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rft1Q8C3B8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rft1Q8C3B8 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rft1Q8C3B8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rft1Q8C3B8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Rft1Q8C3B8 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.95■□□□□ 0.46
Rft1Q8C3B8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Rft1Q8C3B8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rft1Q8C3B8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rft1Q8C3B8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Rft1Q8C3B8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rft1Q8C3B8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rft1Q8C3B8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rft1Q8C3B8 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rft1Q8C3B8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Rft1Q8C3B8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.94■□□□□ 0.46
Rft1Q8C3B8 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rft1Q8C3B8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.94■□□□□ 0.46
Rft1Q8C3B8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rft1Q8C3B8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rft1Q8C3B8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Rft1Q8C3B8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rft1Q8C3B8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rft1Q8C3B8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Rft1Q8C3B8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Rft1Q8C3B8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.93■□□□□ 0.46
Rft1Q8C3B8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rft1Q8C3B8 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.93■□□□□ 0.46
Rft1Q8C3B8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Rft1Q8C3B8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Rft1Q8C3B8 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rft1Q8C3B8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rft1Q8C3B8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rft1Q8C3B8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rft1Q8C3B8 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.92■□□□□ 0.46
Rft1Q8C3B8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rft1Q8C3B8 Gm10232-201ENSMUST00000089221 720 ntBASIC17.92■□□□□ 0.46
Rft1Q8C3B8 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rft1Q8C3B8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rft1Q8C3B8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.92■□□□□ 0.46
Rft1Q8C3B8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rft1Q8C3B8 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rft1Q8C3B8 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rft1Q8C3B8 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rft1Q8C3B8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Rft1Q8C3B8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rft1Q8C3B8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rft1Q8C3B8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rft1Q8C3B8 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Rft1Q8C3B8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rft1Q8C3B8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rft1Q8C3B8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.91■□□□□ 0.46
Rft1Q8C3B8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rft1Q8C3B8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rft1Q8C3B8 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rft1Q8C3B8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rft1Q8C3B8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.9■□□□□ 0.46
Rft1Q8C3B8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rft1Q8C3B8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rft1Q8C3B8 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.9■□□□□ 0.46
Rft1Q8C3B8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Rft1Q8C3B8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rft1Q8C3B8 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Rft1Q8C3B8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rft1Q8C3B8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Rft1Q8C3B8 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rft1Q8C3B8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rft1Q8C3B8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms