Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Usp44Q8C2S0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC24■■□□□ 1.43
Usp44Q8C2S0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Usp44Q8C2S0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Usp44Q8C2S0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
Usp44Q8C2S0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Usp44Q8C2S0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Usp44Q8C2S0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Usp44Q8C2S0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
Usp44Q8C2S0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Usp44Q8C2S0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC23.98■■□□□ 1.43
Usp44Q8C2S0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Usp44Q8C2S0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Usp44Q8C2S0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Usp44Q8C2S0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Usp44Q8C2S0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Usp44Q8C2S0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC23.97■■□□□ 1.43
Usp44Q8C2S0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Usp44Q8C2S0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Usp44Q8C2S0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Usp44Q8C2S0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Usp44Q8C2S0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Usp44Q8C2S0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Usp44Q8C2S0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Usp44Q8C2S0 Gm43530-201ENSMUST00000195920 274 ntBASIC23.96■■□□□ 1.43
Usp44Q8C2S0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Usp44Q8C2S0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Usp44Q8C2S0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
Usp44Q8C2S0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC23.95■■□□□ 1.42
Usp44Q8C2S0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Usp44Q8C2S0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC23.95■■□□□ 1.42
Usp44Q8C2S0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Usp44Q8C2S0 Gm12922-201ENSMUST00000120626 809 ntBASIC23.94■■□□□ 1.42
Usp44Q8C2S0 Hsf1-207ENSMUST00000228371 2102 ntBASIC23.94■■□□□ 1.42
Usp44Q8C2S0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Usp44Q8C2S0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Usp44Q8C2S0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Usp44Q8C2S0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC23.93■■□□□ 1.42
Usp44Q8C2S0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Usp44Q8C2S0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC23.93■■□□□ 1.42
Usp44Q8C2S0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Usp44Q8C2S0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Usp44Q8C2S0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Usp44Q8C2S0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Usp44Q8C2S0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC23.92■■□□□ 1.42
Usp44Q8C2S0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Usp44Q8C2S0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Usp44Q8C2S0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Usp44Q8C2S0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Usp44Q8C2S0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
Usp44Q8C2S0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Usp44Q8C2S0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Usp44Q8C2S0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Usp44Q8C2S0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Usp44Q8C2S0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Usp44Q8C2S0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Usp44Q8C2S0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Usp44Q8C2S0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Usp44Q8C2S0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Usp44Q8C2S0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Usp44Q8C2S0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Usp44Q8C2S0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
Usp44Q8C2S0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Usp44Q8C2S0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Usp44Q8C2S0 Gm37035-201ENSMUST00000194809 2148 ntBASIC23.89■■□□□ 1.41
Usp44Q8C2S0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC23.88■■□□□ 1.41
Usp44Q8C2S0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC23.88■■□□□ 1.41
Usp44Q8C2S0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Usp44Q8C2S0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC23.88■■□□□ 1.41
Usp44Q8C2S0 Golgb1-201ENSMUST00000023534 498 ntBASIC23.88■■□□□ 1.41
Usp44Q8C2S0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Usp44Q8C2S0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Usp44Q8C2S0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Usp44Q8C2S0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Usp44Q8C2S0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Usp44Q8C2S0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Usp44Q8C2S0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Usp44Q8C2S0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Usp44Q8C2S0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Usp44Q8C2S0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Usp44Q8C2S0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC23.86■■□□□ 1.41
Usp44Q8C2S0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Usp44Q8C2S0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Usp44Q8C2S0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Usp44Q8C2S0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Usp44Q8C2S0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC23.86■■□□□ 1.41
Usp44Q8C2S0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Usp44Q8C2S0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Usp44Q8C2S0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Usp44Q8C2S0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Usp44Q8C2S0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
Usp44Q8C2S0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Usp44Q8C2S0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC23.85■■□□□ 1.41
Usp44Q8C2S0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Usp44Q8C2S0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Usp44Q8C2S0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Usp44Q8C2S0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC23.85■■□□□ 1.41
Usp44Q8C2S0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
Usp44Q8C2S0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Usp44Q8C2S0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms