Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ptcd1Q8C2E4 Spcs1-204ENSMUST00000226782 949 ntBASIC25.17■■□□□ 1.62
Ptcd1Q8C2E4 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ptcd1Q8C2E4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ptcd1Q8C2E4 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ptcd1Q8C2E4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Ptcd1Q8C2E4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ptcd1Q8C2E4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC25.16■■□□□ 1.62
Ptcd1Q8C2E4 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Ptcd1Q8C2E4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
Ptcd1Q8C2E4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ptcd1Q8C2E4 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC25.15■■□□□ 1.62
Ptcd1Q8C2E4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Ptcd1Q8C2E4 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Ptcd1Q8C2E4 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Ptcd1Q8C2E4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Ptcd1Q8C2E4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Ptcd1Q8C2E4 Gm40848-201ENSMUST00000221998 324 ntBASIC25.14■■□□□ 1.62
Ptcd1Q8C2E4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Ptcd1Q8C2E4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Ptcd1Q8C2E4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC25.14■■□□□ 1.61
Ptcd1Q8C2E4 Gm42418-201ENSMUST00000182010 1831 ntBASIC25.14■■□□□ 1.61
Ptcd1Q8C2E4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ptcd1Q8C2E4 Gm37415-201ENSMUST00000192265 2054 ntBASIC25.13■■□□□ 1.61
Ptcd1Q8C2E4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
Ptcd1Q8C2E4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ptcd1Q8C2E4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ptcd1Q8C2E4 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ptcd1Q8C2E4 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ptcd1Q8C2E4 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ptcd1Q8C2E4 Dmtn-209ENSMUST00000228295 2572 ntBASIC25.12■■□□□ 1.61
Ptcd1Q8C2E4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ptcd1Q8C2E4 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ptcd1Q8C2E4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
Ptcd1Q8C2E4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Ptcd1Q8C2E4 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC25.12■■□□□ 1.61
Ptcd1Q8C2E4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC25.12■■□□□ 1.61
Ptcd1Q8C2E4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC25.12■■□□□ 1.61
Ptcd1Q8C2E4 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC25.12■■□□□ 1.61
Ptcd1Q8C2E4 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Ptcd1Q8C2E4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Ptcd1Q8C2E4 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ptcd1Q8C2E4 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ptcd1Q8C2E4 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
Ptcd1Q8C2E4 Gm10129-202ENSMUST00000193100 1316 ntBASIC25.12■■□□□ 1.61
Ptcd1Q8C2E4 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ptcd1Q8C2E4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC25.11■■□□□ 1.61
Ptcd1Q8C2E4 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ptcd1Q8C2E4 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ptcd1Q8C2E4 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ptcd1Q8C2E4 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ptcd1Q8C2E4 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ptcd1Q8C2E4 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ptcd1Q8C2E4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ptcd1Q8C2E4 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Ptcd1Q8C2E4 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC25.1■■□□□ 1.61
Ptcd1Q8C2E4 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Ptcd1Q8C2E4 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Ptcd1Q8C2E4 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
Ptcd1Q8C2E4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
Ptcd1Q8C2E4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ptcd1Q8C2E4 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ptcd1Q8C2E4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC25.09■■□□□ 1.61
Ptcd1Q8C2E4 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Ptcd1Q8C2E4 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ptcd1Q8C2E4 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC25.09■■□□□ 1.61
Ptcd1Q8C2E4 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Ptcd1Q8C2E4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Ptcd1Q8C2E4 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
Ptcd1Q8C2E4 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Ptcd1Q8C2E4 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Ptcd1Q8C2E4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC25.08■■□□□ 1.61
Ptcd1Q8C2E4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC25.08■■□□□ 1.61
Ptcd1Q8C2E4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Ptcd1Q8C2E4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
Ptcd1Q8C2E4 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Ptcd1Q8C2E4 Gm18671-201ENSMUST00000214826 683 ntBASIC25.07■■□□□ 1.6
Ptcd1Q8C2E4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ptcd1Q8C2E4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Ptcd1Q8C2E4 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Ptcd1Q8C2E4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC25.06■■□□□ 1.6
Ptcd1Q8C2E4 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ptcd1Q8C2E4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC25.06■■□□□ 1.6
Ptcd1Q8C2E4 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ptcd1Q8C2E4 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
Ptcd1Q8C2E4 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
Ptcd1Q8C2E4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC25.05■■□□□ 1.6
Ptcd1Q8C2E4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Ptcd1Q8C2E4 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ptcd1Q8C2E4 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ptcd1Q8C2E4 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ptcd1Q8C2E4 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC25.04■■□□□ 1.6
Ptcd1Q8C2E4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ptcd1Q8C2E4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ptcd1Q8C2E4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ptcd1Q8C2E4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ptcd1Q8C2E4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC25.03■■□□□ 1.6
Ptcd1Q8C2E4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC25.03■■□□□ 1.6
Ptcd1Q8C2E4 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ptcd1Q8C2E4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms