Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Tsen54Q8C2A2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tsen54Q8C2A2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tsen54Q8C2A2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tsen54Q8C2A2 Gm10420-201ENSMUST00000121713 882 ntBASIC16.88■□□□□ 0.29
Tsen54Q8C2A2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tsen54Q8C2A2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tsen54Q8C2A2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Tsen54Q8C2A2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Tsen54Q8C2A2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tsen54Q8C2A2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tsen54Q8C2A2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tsen54Q8C2A2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tsen54Q8C2A2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tsen54Q8C2A2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Tsen54Q8C2A2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.87■□□□□ 0.29
Tsen54Q8C2A2 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Tsen54Q8C2A2 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.86■□□□□ 0.29
Tsen54Q8C2A2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tsen54Q8C2A2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tsen54Q8C2A2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tsen54Q8C2A2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Tsen54Q8C2A2 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tsen54Q8C2A2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Tsen54Q8C2A2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Tsen54Q8C2A2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.86■□□□□ 0.29
Tsen54Q8C2A2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tsen54Q8C2A2 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.86■□□□□ 0.29
Tsen54Q8C2A2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Tsen54Q8C2A2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.86■□□□□ 0.29
Tsen54Q8C2A2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tsen54Q8C2A2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tsen54Q8C2A2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tsen54Q8C2A2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tsen54Q8C2A2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tsen54Q8C2A2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tsen54Q8C2A2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tsen54Q8C2A2 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.85■□□□□ 0.29
Tsen54Q8C2A2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tsen54Q8C2A2 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.85■□□□□ 0.29
Tsen54Q8C2A2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Tsen54Q8C2A2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Tsen54Q8C2A2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Tsen54Q8C2A2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.85■□□□□ 0.29
Tsen54Q8C2A2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.85■□□□□ 0.29
Tsen54Q8C2A2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tsen54Q8C2A2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.85■□□□□ 0.29
Tsen54Q8C2A2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tsen54Q8C2A2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.84■□□□□ 0.29
Tsen54Q8C2A2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tsen54Q8C2A2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tsen54Q8C2A2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Tsen54Q8C2A2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Tsen54Q8C2A2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tsen54Q8C2A2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tsen54Q8C2A2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tsen54Q8C2A2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Tsen54Q8C2A2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tsen54Q8C2A2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Tsen54Q8C2A2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Tsen54Q8C2A2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tsen54Q8C2A2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Tsen54Q8C2A2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.83■□□□□ 0.28
Tsen54Q8C2A2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.83■□□□□ 0.28
Tsen54Q8C2A2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tsen54Q8C2A2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tsen54Q8C2A2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tsen54Q8C2A2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tsen54Q8C2A2 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tsen54Q8C2A2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tsen54Q8C2A2 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.82■□□□□ 0.28
Tsen54Q8C2A2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tsen54Q8C2A2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tsen54Q8C2A2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Tsen54Q8C2A2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tsen54Q8C2A2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tsen54Q8C2A2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tsen54Q8C2A2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tsen54Q8C2A2 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tsen54Q8C2A2 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tsen54Q8C2A2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tsen54Q8C2A2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Tsen54Q8C2A2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tsen54Q8C2A2 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Tsen54Q8C2A2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tsen54Q8C2A2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tsen54Q8C2A2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tsen54Q8C2A2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Tsen54Q8C2A2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tsen54Q8C2A2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tsen54Q8C2A2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tsen54Q8C2A2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Tsen54Q8C2A2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.81■□□□□ 0.28
Tsen54Q8C2A2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tsen54Q8C2A2 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Tsen54Q8C2A2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tsen54Q8C2A2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tsen54Q8C2A2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tsen54Q8C2A2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tsen54Q8C2A2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms