Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Vps9d1Q8C190 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vps9d1Q8C190 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps9d1Q8C190 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps9d1Q8C190 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps9d1Q8C190 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Vps9d1Q8C190 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Vps9d1Q8C190 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps9d1Q8C190 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps9d1Q8C190 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps9d1Q8C190 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Vps9d1Q8C190 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Vps9d1Q8C190 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps9d1Q8C190 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps9d1Q8C190 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.93■□□□□ 0.62
Vps9d1Q8C190 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.93■□□□□ 0.62
Vps9d1Q8C190 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Vps9d1Q8C190 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps9d1Q8C190 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps9d1Q8C190 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Vps9d1Q8C190 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps9d1Q8C190 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.92■□□□□ 0.62
Vps9d1Q8C190 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Vps9d1Q8C190 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Vps9d1Q8C190 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps9d1Q8C190 Gm45444-201ENSMUST00000211394 898 ntBASIC18.92■□□□□ 0.62
Vps9d1Q8C190 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Vps9d1Q8C190 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.92■□□□□ 0.62
Vps9d1Q8C190 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps9d1Q8C190 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps9d1Q8C190 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps9d1Q8C190 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps9d1Q8C190 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps9d1Q8C190 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Vps9d1Q8C190 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps9d1Q8C190 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.91■□□□□ 0.62
Vps9d1Q8C190 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Vps9d1Q8C190 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.91■□□□□ 0.62
Vps9d1Q8C190 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps9d1Q8C190 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Vps9d1Q8C190 Gm15546-201ENSMUST00000122095 826 ntBASIC18.91■□□□□ 0.62
Vps9d1Q8C190 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps9d1Q8C190 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps9d1Q8C190 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps9d1Q8C190 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Vps9d1Q8C190 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps9d1Q8C190 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps9d1Q8C190 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps9d1Q8C190 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps9d1Q8C190 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Vps9d1Q8C190 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps9d1Q8C190 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Vps9d1Q8C190 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Vps9d1Q8C190 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps9d1Q8C190 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Vps9d1Q8C190 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps9d1Q8C190 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps9d1Q8C190 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
Vps9d1Q8C190 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Vps9d1Q8C190 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps9d1Q8C190 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps9d1Q8C190 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps9d1Q8C190 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Vps9d1Q8C190 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Vps9d1Q8C190 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Vps9d1Q8C190 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Vps9d1Q8C190 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.89■□□□□ 0.62
Vps9d1Q8C190 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps9d1Q8C190 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps9d1Q8C190 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps9d1Q8C190 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Vps9d1Q8C190 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps9d1Q8C190 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps9d1Q8C190 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps9d1Q8C190 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Vps9d1Q8C190 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Vps9d1Q8C190 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Vps9d1Q8C190 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps9d1Q8C190 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.88■□□□□ 0.61
Vps9d1Q8C190 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Vps9d1Q8C190 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.88■□□□□ 0.61
Vps9d1Q8C190 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.87■□□□□ 0.61
Vps9d1Q8C190 Gm13238-201ENSMUST00000117655 780 ntBASIC18.87■□□□□ 0.61
Vps9d1Q8C190 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps9d1Q8C190 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Vps9d1Q8C190 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.87■□□□□ 0.61
Vps9d1Q8C190 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.87■□□□□ 0.61
Vps9d1Q8C190 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Vps9d1Q8C190 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.87■□□□□ 0.61
Vps9d1Q8C190 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps9d1Q8C190 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.87■□□□□ 0.61
Vps9d1Q8C190 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.87■□□□□ 0.61
Vps9d1Q8C190 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Vps9d1Q8C190 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps9d1Q8C190 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps9d1Q8C190 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps9d1Q8C190 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Vps9d1Q8C190 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps9d1Q8C190 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Vps9d1Q8C190 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms