Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd9Q8BYH8 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd9Q8BYH8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd9Q8BYH8 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chd9Q8BYH8 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd9Q8BYH8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd9Q8BYH8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd9Q8BYH8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Chd9Q8BYH8 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chd9Q8BYH8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Chd9Q8BYH8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chd9Q8BYH8 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd9Q8BYH8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd9Q8BYH8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd9Q8BYH8 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.28■□□□□ 0.2
Chd9Q8BYH8 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd9Q8BYH8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd9Q8BYH8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chd9Q8BYH8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chd9Q8BYH8 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.27■□□□□ 0.2
Chd9Q8BYH8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.27■□□□□ 0.2
Chd9Q8BYH8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chd9Q8BYH8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Chd9Q8BYH8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chd9Q8BYH8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chd9Q8BYH8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chd9Q8BYH8 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.26■□□□□ 0.19
Chd9Q8BYH8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chd9Q8BYH8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Chd9Q8BYH8 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.26■□□□□ 0.19
Chd9Q8BYH8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.26■□□□□ 0.19
Chd9Q8BYH8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chd9Q8BYH8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.26■□□□□ 0.19
Chd9Q8BYH8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chd9Q8BYH8 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Chd9Q8BYH8 Gm25925-201ENSMUST00000158314 306 ntBASIC16.25■□□□□ 0.19
Chd9Q8BYH8 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Chd9Q8BYH8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd9Q8BYH8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd9Q8BYH8 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.25■□□□□ 0.19
Chd9Q8BYH8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd9Q8BYH8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chd9Q8BYH8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Chd9Q8BYH8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Chd9Q8BYH8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd9Q8BYH8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.25■□□□□ 0.19
Chd9Q8BYH8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chd9Q8BYH8 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chd9Q8BYH8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.24■□□□□ 0.19
Chd9Q8BYH8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
Chd9Q8BYH8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd9Q8BYH8 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd9Q8BYH8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd9Q8BYH8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chd9Q8BYH8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.24■□□□□ 0.19
Chd9Q8BYH8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chd9Q8BYH8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.24■□□□□ 0.19
Chd9Q8BYH8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd9Q8BYH8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd9Q8BYH8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Chd9Q8BYH8 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.24■□□□□ 0.19
Chd9Q8BYH8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Chd9Q8BYH8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chd9Q8BYH8 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Chd9Q8BYH8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.24■□□□□ 0.19
Chd9Q8BYH8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd9Q8BYH8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.23■□□□□ 0.19
Chd9Q8BYH8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chd9Q8BYH8 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.23■□□□□ 0.19
Chd9Q8BYH8 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.23■□□□□ 0.19
Chd9Q8BYH8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd9Q8BYH8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.23■□□□□ 0.19
Chd9Q8BYH8 Gm18101-201ENSMUST00000215769 548 ntBASIC16.23■□□□□ 0.19
Chd9Q8BYH8 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd9Q8BYH8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Chd9Q8BYH8 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd9Q8BYH8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd9Q8BYH8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chd9Q8BYH8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chd9Q8BYH8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd9Q8BYH8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd9Q8BYH8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd9Q8BYH8 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Chd9Q8BYH8 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd9Q8BYH8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd9Q8BYH8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chd9Q8BYH8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chd9Q8BYH8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.21■□□□□ 0.19
Chd9Q8BYH8 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Chd9Q8BYH8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chd9Q8BYH8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Chd9Q8BYH8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chd9Q8BYH8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chd9Q8BYH8 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chd9Q8BYH8 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chd9Q8BYH8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chd9Q8BYH8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chd9Q8BYH8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Chd9Q8BYH8 Mir5133-201ENSMUST00000174955 77 ntBASIC16.2■□□□□ 0.18
Chd9Q8BYH8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms