Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
SprnQ8BWU1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SprnQ8BWU1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SprnQ8BWU1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SprnQ8BWU1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.02■□□□□ 0.48
SprnQ8BWU1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SprnQ8BWU1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SprnQ8BWU1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SprnQ8BWU1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SprnQ8BWU1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SprnQ8BWU1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SprnQ8BWU1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SprnQ8BWU1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.01■□□□□ 0.47
SprnQ8BWU1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
SprnQ8BWU1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SprnQ8BWU1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SprnQ8BWU1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SprnQ8BWU1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SprnQ8BWU1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SprnQ8BWU1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SprnQ8BWU1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SprnQ8BWU1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SprnQ8BWU1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SprnQ8BWU1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SprnQ8BWU1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SprnQ8BWU1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SprnQ8BWU1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SprnQ8BWU1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SprnQ8BWU1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SprnQ8BWU1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
SprnQ8BWU1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SprnQ8BWU1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.99■□□□□ 0.47
SprnQ8BWU1 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.99■□□□□ 0.47
SprnQ8BWU1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SprnQ8BWU1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SprnQ8BWU1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.99■□□□□ 0.47
SprnQ8BWU1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SprnQ8BWU1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SprnQ8BWU1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SprnQ8BWU1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SprnQ8BWU1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
SprnQ8BWU1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SprnQ8BWU1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SprnQ8BWU1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SprnQ8BWU1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SprnQ8BWU1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SprnQ8BWU1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SprnQ8BWU1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SprnQ8BWU1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SprnQ8BWU1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SprnQ8BWU1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SprnQ8BWU1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.97■□□□□ 0.47
SprnQ8BWU1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.97■□□□□ 0.47
SprnQ8BWU1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SprnQ8BWU1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SprnQ8BWU1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SprnQ8BWU1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SprnQ8BWU1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.97■□□□□ 0.47
SprnQ8BWU1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SprnQ8BWU1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SprnQ8BWU1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SprnQ8BWU1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SprnQ8BWU1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.96■□□□□ 0.47
SprnQ8BWU1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SprnQ8BWU1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SprnQ8BWU1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SprnQ8BWU1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SprnQ8BWU1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SprnQ8BWU1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SprnQ8BWU1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SprnQ8BWU1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.95■□□□□ 0.46
SprnQ8BWU1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SprnQ8BWU1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SprnQ8BWU1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SprnQ8BWU1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.95■□□□□ 0.46
SprnQ8BWU1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SprnQ8BWU1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SprnQ8BWU1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SprnQ8BWU1 Gm5921-201ENSMUST00000075898 882 ntBASIC17.94■□□□□ 0.46
SprnQ8BWU1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SprnQ8BWU1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SprnQ8BWU1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SprnQ8BWU1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.93■□□□□ 0.46
SprnQ8BWU1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SprnQ8BWU1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SprnQ8BWU1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SprnQ8BWU1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SprnQ8BWU1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SprnQ8BWU1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SprnQ8BWU1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.93■□□□□ 0.46
SprnQ8BWU1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SprnQ8BWU1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SprnQ8BWU1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SprnQ8BWU1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SprnQ8BWU1 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SprnQ8BWU1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SprnQ8BWU1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SprnQ8BWU1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SprnQ8BWU1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.91■□□□□ 0.46
SprnQ8BWU1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms