Protein–RNA interactions for Protein: Q8BV79

Trank1, TPR and ankyrin repeat-containing protein 1, mousemouse

Predictions only

Length 2,999 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trank1Q8BV79 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.88■□□□□ 0.45
Trank1Q8BV79 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trank1Q8BV79 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trank1Q8BV79 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trank1Q8BV79 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Trank1Q8BV79 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trank1Q8BV79 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.87■□□□□ 0.45
Trank1Q8BV79 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trank1Q8BV79 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trank1Q8BV79 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.87■□□□□ 0.45
Trank1Q8BV79 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trank1Q8BV79 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trank1Q8BV79 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trank1Q8BV79 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trank1Q8BV79 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trank1Q8BV79 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.86■□□□□ 0.45
Trank1Q8BV79 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trank1Q8BV79 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trank1Q8BV79 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trank1Q8BV79 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Trank1Q8BV79 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trank1Q8BV79 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trank1Q8BV79 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trank1Q8BV79 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trank1Q8BV79 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trank1Q8BV79 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trank1Q8BV79 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trank1Q8BV79 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trank1Q8BV79 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trank1Q8BV79 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trank1Q8BV79 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.85■□□□□ 0.45
Trank1Q8BV79 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.84■□□□□ 0.45
Trank1Q8BV79 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trank1Q8BV79 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trank1Q8BV79 Nespas-201ENSMUST00000143738 1083 ntBASIC17.84■□□□□ 0.45
Trank1Q8BV79 Gm42778-201ENSMUST00000199644 553 ntBASIC17.83■□□□□ 0.45
Trank1Q8BV79 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Trank1Q8BV79 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trank1Q8BV79 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trank1Q8BV79 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trank1Q8BV79 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trank1Q8BV79 Gm10252-201ENSMUST00000209541 832 ntBASIC17.82■□□□□ 0.44
Trank1Q8BV79 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.82■□□□□ 0.44
Trank1Q8BV79 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trank1Q8BV79 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trank1Q8BV79 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trank1Q8BV79 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trank1Q8BV79 Gm10653-202ENSMUST00000139570 835 ntBASIC17.82■□□□□ 0.44
Trank1Q8BV79 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trank1Q8BV79 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trank1Q8BV79 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trank1Q8BV79 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trank1Q8BV79 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trank1Q8BV79 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trank1Q8BV79 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trank1Q8BV79 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trank1Q8BV79 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trank1Q8BV79 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Trank1Q8BV79 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.81■□□□□ 0.44
Trank1Q8BV79 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trank1Q8BV79 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trank1Q8BV79 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.8■□□□□ 0.44
Trank1Q8BV79 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.8■□□□□ 0.44
Trank1Q8BV79 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.8■□□□□ 0.44
Trank1Q8BV79 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trank1Q8BV79 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trank1Q8BV79 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.8■□□□□ 0.44
Trank1Q8BV79 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trank1Q8BV79 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trank1Q8BV79 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trank1Q8BV79 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trank1Q8BV79 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.8■□□□□ 0.44
Trank1Q8BV79 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trank1Q8BV79 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.8■□□□□ 0.44
Trank1Q8BV79 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trank1Q8BV79 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.8■□□□□ 0.44
Trank1Q8BV79 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trank1Q8BV79 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trank1Q8BV79 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trank1Q8BV79 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trank1Q8BV79 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trank1Q8BV79 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trank1Q8BV79 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trank1Q8BV79 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trank1Q8BV79 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trank1Q8BV79 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.79■□□□□ 0.44
Trank1Q8BV79 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trank1Q8BV79 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.79■□□□□ 0.44
Trank1Q8BV79 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trank1Q8BV79 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trank1Q8BV79 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trank1Q8BV79 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trank1Q8BV79 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.79■□□□□ 0.44
Trank1Q8BV79 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trank1Q8BV79 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trank1Q8BV79 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Trank1Q8BV79 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trank1Q8BV79 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trank1Q8BV79 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trank1Q8BV79 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms