Protein–RNA interactions for Protein: Q8BTF7

Lig4, DNA ligase 4, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4Q8BTF7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Lig4Q8BTF7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.56■■□□□ 1.04
Lig4Q8BTF7 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lig4Q8BTF7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lig4Q8BTF7 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lig4Q8BTF7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Lig4Q8BTF7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lig4Q8BTF7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.55■■□□□ 1.04
Lig4Q8BTF7 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.55■■□□□ 1.04
Lig4Q8BTF7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lig4Q8BTF7 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lig4Q8BTF7 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lig4Q8BTF7 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lig4Q8BTF7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lig4Q8BTF7 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lig4Q8BTF7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lig4Q8BTF7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Lig4Q8BTF7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lig4Q8BTF7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lig4Q8BTF7 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.54■■□□□ 1.04
Lig4Q8BTF7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lig4Q8BTF7 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lig4Q8BTF7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Lig4Q8BTF7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lig4Q8BTF7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lig4Q8BTF7 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lig4Q8BTF7 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lig4Q8BTF7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Lig4Q8BTF7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lig4Q8BTF7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Lig4Q8BTF7 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lig4Q8BTF7 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lig4Q8BTF7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Lig4Q8BTF7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.52■■□□□ 1.04
Lig4Q8BTF7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Lig4Q8BTF7 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.52■■□□□ 1.04
Lig4Q8BTF7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.52■■□□□ 1.03
Lig4Q8BTF7 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lig4Q8BTF7 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Lig4Q8BTF7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lig4Q8BTF7 Gm27454-201ENSMUST00000185090 204 ntBASIC21.51■■□□□ 1.03
Lig4Q8BTF7 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lig4Q8BTF7 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Lig4Q8BTF7 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lig4Q8BTF7 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Lig4Q8BTF7 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lig4Q8BTF7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lig4Q8BTF7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lig4Q8BTF7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lig4Q8BTF7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lig4Q8BTF7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.5■■□□□ 1.03
Lig4Q8BTF7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Lig4Q8BTF7 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lig4Q8BTF7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Lig4Q8BTF7 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Lig4Q8BTF7 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lig4Q8BTF7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lig4Q8BTF7 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lig4Q8BTF7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.49■■□□□ 1.03
Lig4Q8BTF7 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Lig4Q8BTF7 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lig4Q8BTF7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lig4Q8BTF7 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lig4Q8BTF7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lig4Q8BTF7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lig4Q8BTF7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lig4Q8BTF7 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lig4Q8BTF7 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.48■■□□□ 1.03
Lig4Q8BTF7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.48■■□□□ 1.03
Lig4Q8BTF7 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lig4Q8BTF7 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lig4Q8BTF7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lig4Q8BTF7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lig4Q8BTF7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Lig4Q8BTF7 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Lig4Q8BTF7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.47■■□□□ 1.03
Lig4Q8BTF7 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lig4Q8BTF7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Lig4Q8BTF7 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Lig4Q8BTF7 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lig4Q8BTF7 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lig4Q8BTF7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lig4Q8BTF7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.46■■□□□ 1.03
Lig4Q8BTF7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lig4Q8BTF7 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lig4Q8BTF7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Lig4Q8BTF7 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Lig4Q8BTF7 Gm15039-201ENSMUST00000118914 875 ntBASIC21.46■■□□□ 1.03
Lig4Q8BTF7 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Lig4Q8BTF7 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Lig4Q8BTF7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Lig4Q8BTF7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.03
Lig4Q8BTF7 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lig4Q8BTF7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.45■■□□□ 1.02
Lig4Q8BTF7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lig4Q8BTF7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lig4Q8BTF7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Lig4Q8BTF7 Gm43137-201ENSMUST00000198052 594 ntBASIC21.45■■□□□ 1.02
Lig4Q8BTF7 Gm45417-201ENSMUST00000209533 758 ntBASIC21.45■■□□□ 1.02
Lig4Q8BTF7 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms