Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Suds3Q8BR65 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Suds3Q8BR65 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Suds3Q8BR65 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Suds3Q8BR65 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Suds3Q8BR65 Gm40881-201ENSMUST00000223397 166 ntBASIC20.71■□□□□ 0.91
Suds3Q8BR65 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Suds3Q8BR65 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Suds3Q8BR65 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Suds3Q8BR65 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Suds3Q8BR65 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Suds3Q8BR65 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Suds3Q8BR65 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Suds3Q8BR65 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Suds3Q8BR65 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Suds3Q8BR65 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Suds3Q8BR65 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Suds3Q8BR65 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Suds3Q8BR65 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.7■□□□□ 0.9
Suds3Q8BR65 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Suds3Q8BR65 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Suds3Q8BR65 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Suds3Q8BR65 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Suds3Q8BR65 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Suds3Q8BR65 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Suds3Q8BR65 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Suds3Q8BR65 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Suds3Q8BR65 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Suds3Q8BR65 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Suds3Q8BR65 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Suds3Q8BR65 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.69■□□□□ 0.9
Suds3Q8BR65 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Suds3Q8BR65 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Suds3Q8BR65 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Suds3Q8BR65 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Suds3Q8BR65 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.68■□□□□ 0.9
Suds3Q8BR65 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Suds3Q8BR65 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Suds3Q8BR65 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Suds3Q8BR65 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Suds3Q8BR65 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Suds3Q8BR65 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Suds3Q8BR65 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Suds3Q8BR65 Gm10399-202ENSMUST00000202768 748 ntBASIC20.67■□□□□ 0.9
Suds3Q8BR65 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Suds3Q8BR65 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Suds3Q8BR65 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Suds3Q8BR65 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Suds3Q8BR65 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Suds3Q8BR65 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Suds3Q8BR65 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
Suds3Q8BR65 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Suds3Q8BR65 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Suds3Q8BR65 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Suds3Q8BR65 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Suds3Q8BR65 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Suds3Q8BR65 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Suds3Q8BR65 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Suds3Q8BR65 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Suds3Q8BR65 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Suds3Q8BR65 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Suds3Q8BR65 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Suds3Q8BR65 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Suds3Q8BR65 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Suds3Q8BR65 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Suds3Q8BR65 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Suds3Q8BR65 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.65■□□□□ 0.9
Suds3Q8BR65 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Suds3Q8BR65 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.65■□□□□ 0.9
Suds3Q8BR65 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.65■□□□□ 0.9
Suds3Q8BR65 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Suds3Q8BR65 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Suds3Q8BR65 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.64■□□□□ 0.9
Suds3Q8BR65 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Suds3Q8BR65 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.64■□□□□ 0.89
Suds3Q8BR65 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.64■□□□□ 0.89
Suds3Q8BR65 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Suds3Q8BR65 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Suds3Q8BR65 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
Suds3Q8BR65 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Suds3Q8BR65 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Suds3Q8BR65 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Suds3Q8BR65 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Suds3Q8BR65 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.63■□□□□ 0.89
Suds3Q8BR65 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.63■□□□□ 0.89
Suds3Q8BR65 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Suds3Q8BR65 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
Suds3Q8BR65 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Suds3Q8BR65 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Suds3Q8BR65 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Suds3Q8BR65 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Suds3Q8BR65 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Suds3Q8BR65 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Suds3Q8BR65 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Suds3Q8BR65 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Suds3Q8BR65 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Suds3Q8BR65 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Suds3Q8BR65 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Suds3Q8BR65 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Suds3Q8BR65 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms