Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Smco3Q8BQM7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Smco3Q8BQM7 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Smco3Q8BQM7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smco3Q8BQM7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smco3Q8BQM7 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smco3Q8BQM7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smco3Q8BQM7 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smco3Q8BQM7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smco3Q8BQM7 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smco3Q8BQM7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smco3Q8BQM7 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smco3Q8BQM7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smco3Q8BQM7 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smco3Q8BQM7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smco3Q8BQM7 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smco3Q8BQM7 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smco3Q8BQM7 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smco3Q8BQM7 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC16.69■□□□□ 0.26
Smco3Q8BQM7 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smco3Q8BQM7 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Smco3Q8BQM7 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smco3Q8BQM7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smco3Q8BQM7 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.69■□□□□ 0.26
Smco3Q8BQM7 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smco3Q8BQM7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smco3Q8BQM7 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smco3Q8BQM7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smco3Q8BQM7 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Smco3Q8BQM7 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smco3Q8BQM7 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smco3Q8BQM7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smco3Q8BQM7 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smco3Q8BQM7 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Smco3Q8BQM7 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC16.68■□□□□ 0.26
Smco3Q8BQM7 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC16.68■□□□□ 0.26
Smco3Q8BQM7 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Smco3Q8BQM7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smco3Q8BQM7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smco3Q8BQM7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smco3Q8BQM7 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Smco3Q8BQM7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smco3Q8BQM7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Smco3Q8BQM7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Smco3Q8BQM7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smco3Q8BQM7 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.67■□□□□ 0.26
Smco3Q8BQM7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smco3Q8BQM7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smco3Q8BQM7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smco3Q8BQM7 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.67■□□□□ 0.26
Smco3Q8BQM7 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.67■□□□□ 0.26
Smco3Q8BQM7 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Smco3Q8BQM7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Smco3Q8BQM7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smco3Q8BQM7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smco3Q8BQM7 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smco3Q8BQM7 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Smco3Q8BQM7 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smco3Q8BQM7 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smco3Q8BQM7 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.66■□□□□ 0.26
Smco3Q8BQM7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smco3Q8BQM7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smco3Q8BQM7 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Smco3Q8BQM7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Smco3Q8BQM7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smco3Q8BQM7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smco3Q8BQM7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Smco3Q8BQM7 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smco3Q8BQM7 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smco3Q8BQM7 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smco3Q8BQM7 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC16.65■□□□□ 0.26
Smco3Q8BQM7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smco3Q8BQM7 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smco3Q8BQM7 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smco3Q8BQM7 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smco3Q8BQM7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smco3Q8BQM7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Smco3Q8BQM7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smco3Q8BQM7 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Smco3Q8BQM7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smco3Q8BQM7 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smco3Q8BQM7 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Smco3Q8BQM7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smco3Q8BQM7 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Smco3Q8BQM7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smco3Q8BQM7 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
Smco3Q8BQM7 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smco3Q8BQM7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Smco3Q8BQM7 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smco3Q8BQM7 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smco3Q8BQM7 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smco3Q8BQM7 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smco3Q8BQM7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smco3Q8BQM7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smco3Q8BQM7 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smco3Q8BQM7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smco3Q8BQM7 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Smco3Q8BQM7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Smco3Q8BQM7 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Smco3Q8BQM7 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms