Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Prpf18Q8BM39 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf18Q8BM39 Gm10420-201ENSMUST00000121713 882 ntBASIC19.21■□□□□ 0.67
Prpf18Q8BM39 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf18Q8BM39 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.21■□□□□ 0.67
Prpf18Q8BM39 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf18Q8BM39 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf18Q8BM39 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf18Q8BM39 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf18Q8BM39 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.2■□□□□ 0.66
Prpf18Q8BM39 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Prpf18Q8BM39 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.2■□□□□ 0.66
Prpf18Q8BM39 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf18Q8BM39 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf18Q8BM39 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf18Q8BM39 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.2■□□□□ 0.66
Prpf18Q8BM39 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf18Q8BM39 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf18Q8BM39 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.19■□□□□ 0.66
Prpf18Q8BM39 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Prpf18Q8BM39 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf18Q8BM39 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Prpf18Q8BM39 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf18Q8BM39 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Prpf18Q8BM39 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf18Q8BM39 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf18Q8BM39 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf18Q8BM39 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Prpf18Q8BM39 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.18■□□□□ 0.66
Prpf18Q8BM39 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf18Q8BM39 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf18Q8BM39 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Prpf18Q8BM39 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf18Q8BM39 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.18■□□□□ 0.66
Prpf18Q8BM39 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Prpf18Q8BM39 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf18Q8BM39 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf18Q8BM39 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf18Q8BM39 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf18Q8BM39 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf18Q8BM39 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf18Q8BM39 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf18Q8BM39 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.17■□□□□ 0.66
Prpf18Q8BM39 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Prpf18Q8BM39 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.17■□□□□ 0.66
Prpf18Q8BM39 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf18Q8BM39 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf18Q8BM39 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf18Q8BM39 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf18Q8BM39 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf18Q8BM39 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Prpf18Q8BM39 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf18Q8BM39 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf18Q8BM39 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf18Q8BM39 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf18Q8BM39 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf18Q8BM39 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf18Q8BM39 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf18Q8BM39 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf18Q8BM39 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf18Q8BM39 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf18Q8BM39 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf18Q8BM39 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.15■□□□□ 0.66
Prpf18Q8BM39 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf18Q8BM39 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf18Q8BM39 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf18Q8BM39 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.15■□□□□ 0.66
Prpf18Q8BM39 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf18Q8BM39 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf18Q8BM39 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Prpf18Q8BM39 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Prpf18Q8BM39 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf18Q8BM39 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Prpf18Q8BM39 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf18Q8BM39 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf18Q8BM39 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.14■□□□□ 0.65
Prpf18Q8BM39 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf18Q8BM39 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf18Q8BM39 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf18Q8BM39 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf18Q8BM39 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf18Q8BM39 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf18Q8BM39 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf18Q8BM39 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf18Q8BM39 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf18Q8BM39 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf18Q8BM39 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Prpf18Q8BM39 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf18Q8BM39 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf18Q8BM39 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Prpf18Q8BM39 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf18Q8BM39 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf18Q8BM39 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Prpf18Q8BM39 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf18Q8BM39 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf18Q8BM39 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf18Q8BM39 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf18Q8BM39 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf18Q8BM39 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf18Q8BM39 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms