Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdhr3Q8BL00 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdhr3Q8BL00 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdhr3Q8BL00 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.77■□□□□ 0.44
Cdhr3Q8BL00 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cdhr3Q8BL00 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cdhr3Q8BL00 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdhr3Q8BL00 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cdhr3Q8BL00 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Cdhr3Q8BL00 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cdhr3Q8BL00 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cdhr3Q8BL00 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdhr3Q8BL00 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.76■□□□□ 0.43
Cdhr3Q8BL00 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cdhr3Q8BL00 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdhr3Q8BL00 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdhr3Q8BL00 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdhr3Q8BL00 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdhr3Q8BL00 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cdhr3Q8BL00 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdhr3Q8BL00 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cdhr3Q8BL00 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.75■□□□□ 0.43
Cdhr3Q8BL00 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Cdhr3Q8BL00 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.75■□□□□ 0.43
Cdhr3Q8BL00 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cdhr3Q8BL00 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cdhr3Q8BL00 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.75■□□□□ 0.43
Cdhr3Q8BL00 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdhr3Q8BL00 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdhr3Q8BL00 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cdhr3Q8BL00 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdhr3Q8BL00 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdhr3Q8BL00 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdhr3Q8BL00 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdhr3Q8BL00 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdhr3Q8BL00 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cdhr3Q8BL00 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdhr3Q8BL00 Golph3-202ENSMUST00000226517 2359 ntBASIC17.74■□□□□ 0.43
Cdhr3Q8BL00 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Cdhr3Q8BL00 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdhr3Q8BL00 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Cdhr3Q8BL00 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cdhr3Q8BL00 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.73■□□□□ 0.43
Cdhr3Q8BL00 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdhr3Q8BL00 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdhr3Q8BL00 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Cdhr3Q8BL00 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cdhr3Q8BL00 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cdhr3Q8BL00 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.73■□□□□ 0.43
Cdhr3Q8BL00 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cdhr3Q8BL00 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.73■□□□□ 0.43
Cdhr3Q8BL00 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdhr3Q8BL00 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdhr3Q8BL00 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdhr3Q8BL00 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cdhr3Q8BL00 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cdhr3Q8BL00 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.72■□□□□ 0.43
Cdhr3Q8BL00 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdhr3Q8BL00 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdhr3Q8BL00 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdhr3Q8BL00 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.72■□□□□ 0.43
Cdhr3Q8BL00 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdhr3Q8BL00 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cdhr3Q8BL00 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdhr3Q8BL00 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdhr3Q8BL00 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdhr3Q8BL00 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdhr3Q8BL00 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdhr3Q8BL00 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdhr3Q8BL00 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdhr3Q8BL00 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdhr3Q8BL00 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.71■□□□□ 0.43
Cdhr3Q8BL00 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdhr3Q8BL00 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Cdhr3Q8BL00 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Cdhr3Q8BL00 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cdhr3Q8BL00 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdhr3Q8BL00 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdhr3Q8BL00 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.7■□□□□ 0.42
Cdhr3Q8BL00 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cdhr3Q8BL00 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cdhr3Q8BL00 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cdhr3Q8BL00 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cdhr3Q8BL00 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.7■□□□□ 0.42
Cdhr3Q8BL00 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdhr3Q8BL00 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdhr3Q8BL00 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdhr3Q8BL00 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdhr3Q8BL00 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdhr3Q8BL00 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdhr3Q8BL00 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdhr3Q8BL00 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cdhr3Q8BL00 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdhr3Q8BL00 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Cdhr3Q8BL00 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cdhr3Q8BL00 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.68■□□□□ 0.42
Cdhr3Q8BL00 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdhr3Q8BL00 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdhr3Q8BL00 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdhr3Q8BL00 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms