Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.78■□□□□ 0.92
Chmp2bQ8BJF9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp2bQ8BJF9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp2bQ8BJF9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp2bQ8BJF9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Chmp2bQ8BJF9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Chmp2bQ8BJF9 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.77■□□□□ 0.92
Chmp2bQ8BJF9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp2bQ8BJF9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp2bQ8BJF9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
Chmp2bQ8BJF9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp2bQ8BJF9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp2bQ8BJF9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp2bQ8BJF9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Chmp2bQ8BJF9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp2bQ8BJF9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.76■□□□□ 0.91
Chmp2bQ8BJF9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Chmp2bQ8BJF9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp2bQ8BJF9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp2bQ8BJF9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp2bQ8BJF9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp2bQ8BJF9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp2bQ8BJF9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp2bQ8BJF9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp2bQ8BJF9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Chmp2bQ8BJF9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp2bQ8BJF9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp2bQ8BJF9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.75■□□□□ 0.91
Chmp2bQ8BJF9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp2bQ8BJF9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Chmp2bQ8BJF9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Chmp2bQ8BJF9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp2bQ8BJF9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp2bQ8BJF9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.75■□□□□ 0.91
Chmp2bQ8BJF9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp2bQ8BJF9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp2bQ8BJF9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp2bQ8BJF9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp2bQ8BJF9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp2bQ8BJF9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp2bQ8BJF9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp2bQ8BJF9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp2bQ8BJF9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp2bQ8BJF9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp2bQ8BJF9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp2bQ8BJF9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp2bQ8BJF9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp2bQ8BJF9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp2bQ8BJF9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Chmp2bQ8BJF9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.72■□□□□ 0.91
Chmp2bQ8BJF9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp2bQ8BJF9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp2bQ8BJF9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp2bQ8BJF9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp2bQ8BJF9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp2bQ8BJF9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp2bQ8BJF9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.71■□□□□ 0.91
Chmp2bQ8BJF9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp2bQ8BJF9 Gm45444-201ENSMUST00000211394 898 ntBASIC20.71■□□□□ 0.91
Chmp2bQ8BJF9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.71■□□□□ 0.91
Chmp2bQ8BJF9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Chmp2bQ8BJF9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Chmp2bQ8BJF9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.71■□□□□ 0.91
Chmp2bQ8BJF9 Cap2-205ENSMUST00000225824 1634 ntBASIC20.71■□□□□ 0.91
Chmp2bQ8BJF9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp2bQ8BJF9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp2bQ8BJF9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Chmp2bQ8BJF9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Chmp2bQ8BJF9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp2bQ8BJF9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp2bQ8BJF9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Chmp2bQ8BJF9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp2bQ8BJF9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Chmp2bQ8BJF9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.7■□□□□ 0.9
Chmp2bQ8BJF9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Chmp2bQ8BJF9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp2bQ8BJF9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp2bQ8BJF9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp2bQ8BJF9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp2bQ8BJF9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Chmp2bQ8BJF9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp2bQ8BJF9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp2bQ8BJF9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp2bQ8BJF9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp2bQ8BJF9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Chmp2bQ8BJF9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.69■□□□□ 0.9
Chmp2bQ8BJF9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp2bQ8BJF9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp2bQ8BJF9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.69■□□□□ 0.9
Chmp2bQ8BJF9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.69■□□□□ 0.9
Chmp2bQ8BJF9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Chmp2bQ8BJF9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp2bQ8BJF9 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.68■□□□□ 0.9
Chmp2bQ8BJF9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp2bQ8BJF9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.68■□□□□ 0.9
Chmp2bQ8BJF9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.68■□□□□ 0.9
Chmp2bQ8BJF9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.68■□□□□ 0.9
Chmp2bQ8BJF9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.68■□□□□ 0.9
Chmp2bQ8BJF9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Chmp2bQ8BJF9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms