Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh20Q8BIZ0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh20Q8BIZ0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh20Q8BIZ0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh20Q8BIZ0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh20Q8BIZ0 Gm10399-202ENSMUST00000202768 748 ntBASIC19.73■□□□□ 0.75
Pcdh20Q8BIZ0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh20Q8BIZ0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh20Q8BIZ0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Pcdh20Q8BIZ0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh20Q8BIZ0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh20Q8BIZ0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh20Q8BIZ0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh20Q8BIZ0 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh20Q8BIZ0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh20Q8BIZ0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh20Q8BIZ0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh20Q8BIZ0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Pcdh20Q8BIZ0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.72■□□□□ 0.75
Pcdh20Q8BIZ0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh20Q8BIZ0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh20Q8BIZ0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Pcdh20Q8BIZ0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.72■□□□□ 0.75
Pcdh20Q8BIZ0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Pcdh20Q8BIZ0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Pcdh20Q8BIZ0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh20Q8BIZ0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Pcdh20Q8BIZ0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh20Q8BIZ0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.71■□□□□ 0.75
Pcdh20Q8BIZ0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh20Q8BIZ0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.71■□□□□ 0.75
Pcdh20Q8BIZ0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.71■□□□□ 0.75
Pcdh20Q8BIZ0 Gm40881-201ENSMUST00000223397 166 ntBASIC19.71■□□□□ 0.75
Pcdh20Q8BIZ0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh20Q8BIZ0 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.71■□□□□ 0.75
Pcdh20Q8BIZ0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh20Q8BIZ0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh20Q8BIZ0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh20Q8BIZ0 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh20Q8BIZ0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh20Q8BIZ0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh20Q8BIZ0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh20Q8BIZ0 Gm7417-201ENSMUST00000192950 473 ntBASIC19.7■□□□□ 0.74
Pcdh20Q8BIZ0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh20Q8BIZ0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh20Q8BIZ0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh20Q8BIZ0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh20Q8BIZ0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh20Q8BIZ0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh20Q8BIZ0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh20Q8BIZ0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh20Q8BIZ0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh20Q8BIZ0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh20Q8BIZ0 Golph3-202ENSMUST00000226517 2359 ntBASIC19.69■□□□□ 0.74
Pcdh20Q8BIZ0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Pcdh20Q8BIZ0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh20Q8BIZ0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.69■□□□□ 0.74
Pcdh20Q8BIZ0 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.69■□□□□ 0.74
Pcdh20Q8BIZ0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.69■□□□□ 0.74
Pcdh20Q8BIZ0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh20Q8BIZ0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh20Q8BIZ0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh20Q8BIZ0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Pcdh20Q8BIZ0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh20Q8BIZ0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh20Q8BIZ0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh20Q8BIZ0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh20Q8BIZ0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh20Q8BIZ0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh20Q8BIZ0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Pcdh20Q8BIZ0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh20Q8BIZ0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh20Q8BIZ0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh20Q8BIZ0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh20Q8BIZ0 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh20Q8BIZ0 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh20Q8BIZ0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Pcdh20Q8BIZ0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.67■□□□□ 0.74
Pcdh20Q8BIZ0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh20Q8BIZ0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh20Q8BIZ0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh20Q8BIZ0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Pcdh20Q8BIZ0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh20Q8BIZ0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Pcdh20Q8BIZ0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Pcdh20Q8BIZ0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.66■□□□□ 0.74
Pcdh20Q8BIZ0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh20Q8BIZ0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh20Q8BIZ0 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.66■□□□□ 0.74
Pcdh20Q8BIZ0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh20Q8BIZ0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh20Q8BIZ0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh20Q8BIZ0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Pcdh20Q8BIZ0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh20Q8BIZ0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh20Q8BIZ0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Pcdh20Q8BIZ0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh20Q8BIZ0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Pcdh20Q8BIZ0 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh20Q8BIZ0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms