Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clrn3Q8BHH8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clrn3Q8BHH8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clrn3Q8BHH8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clrn3Q8BHH8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clrn3Q8BHH8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clrn3Q8BHH8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clrn3Q8BHH8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.99■□□□□ 0.63
Clrn3Q8BHH8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.99■□□□□ 0.63
Clrn3Q8BHH8 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.99■□□□□ 0.63
Clrn3Q8BHH8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clrn3Q8BHH8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Clrn3Q8BHH8 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clrn3Q8BHH8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clrn3Q8BHH8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clrn3Q8BHH8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clrn3Q8BHH8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clrn3Q8BHH8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clrn3Q8BHH8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clrn3Q8BHH8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clrn3Q8BHH8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clrn3Q8BHH8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Clrn3Q8BHH8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.97■□□□□ 0.63
Clrn3Q8BHH8 Etf1-202ENSMUST00000180351 108 ntBASIC18.97■□□□□ 0.63
Clrn3Q8BHH8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Clrn3Q8BHH8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Clrn3Q8BHH8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clrn3Q8BHH8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clrn3Q8BHH8 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Clrn3Q8BHH8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.96■□□□□ 0.63
Clrn3Q8BHH8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Clrn3Q8BHH8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clrn3Q8BHH8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.96■□□□□ 0.63
Clrn3Q8BHH8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.96■□□□□ 0.63
Clrn3Q8BHH8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.96■□□□□ 0.63
Clrn3Q8BHH8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Clrn3Q8BHH8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.96■□□□□ 0.63
Clrn3Q8BHH8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.96■□□□□ 0.63
Clrn3Q8BHH8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clrn3Q8BHH8 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.96■□□□□ 0.63
Clrn3Q8BHH8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clrn3Q8BHH8 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.95■□□□□ 0.62
Clrn3Q8BHH8 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Clrn3Q8BHH8 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Clrn3Q8BHH8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Clrn3Q8BHH8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.95■□□□□ 0.62
Clrn3Q8BHH8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.95■□□□□ 0.62
Clrn3Q8BHH8 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.95■□□□□ 0.62
Clrn3Q8BHH8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clrn3Q8BHH8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clrn3Q8BHH8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Clrn3Q8BHH8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Clrn3Q8BHH8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clrn3Q8BHH8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.95■□□□□ 0.62
Clrn3Q8BHH8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clrn3Q8BHH8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clrn3Q8BHH8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.94■□□□□ 0.62
Clrn3Q8BHH8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Clrn3Q8BHH8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clrn3Q8BHH8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clrn3Q8BHH8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Clrn3Q8BHH8 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clrn3Q8BHH8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Clrn3Q8BHH8 Rps24-207ENSMUST00000224568 714 ntBASIC18.94■□□□□ 0.62
Clrn3Q8BHH8 Gm9959-201ENSMUST00000068277 390 ntBASIC18.94■□□□□ 0.62
Clrn3Q8BHH8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.94■□□□□ 0.62
Clrn3Q8BHH8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clrn3Q8BHH8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clrn3Q8BHH8 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clrn3Q8BHH8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clrn3Q8BHH8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clrn3Q8BHH8 Gm45102-201ENSMUST00000207427 857 ntBASIC18.93■□□□□ 0.62
Clrn3Q8BHH8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Clrn3Q8BHH8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Clrn3Q8BHH8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clrn3Q8BHH8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clrn3Q8BHH8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.93■□□□□ 0.62
Clrn3Q8BHH8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clrn3Q8BHH8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Clrn3Q8BHH8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Clrn3Q8BHH8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Clrn3Q8BHH8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clrn3Q8BHH8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clrn3Q8BHH8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Clrn3Q8BHH8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clrn3Q8BHH8 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clrn3Q8BHH8 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clrn3Q8BHH8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clrn3Q8BHH8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Clrn3Q8BHH8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clrn3Q8BHH8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clrn3Q8BHH8 Golph3-202ENSMUST00000226517 2359 ntBASIC18.91■□□□□ 0.62
Clrn3Q8BHH8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clrn3Q8BHH8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Clrn3Q8BHH8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Clrn3Q8BHH8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clrn3Q8BHH8 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Clrn3Q8BHH8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clrn3Q8BHH8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.91■□□□□ 0.62
Clrn3Q8BHH8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms