Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smndc1Q8BGT7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
Smndc1Q8BGT7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
Smndc1Q8BGT7 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smndc1Q8BGT7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smndc1Q8BGT7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smndc1Q8BGT7 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smndc1Q8BGT7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smndc1Q8BGT7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smndc1Q8BGT7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smndc1Q8BGT7 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Smndc1Q8BGT7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smndc1Q8BGT7 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smndc1Q8BGT7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smndc1Q8BGT7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smndc1Q8BGT7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.49■□□□□ 0.71
Smndc1Q8BGT7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smndc1Q8BGT7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.49■□□□□ 0.71
Smndc1Q8BGT7 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smndc1Q8BGT7 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smndc1Q8BGT7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Smndc1Q8BGT7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Smndc1Q8BGT7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smndc1Q8BGT7 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Smndc1Q8BGT7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Smndc1Q8BGT7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smndc1Q8BGT7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smndc1Q8BGT7 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Smndc1Q8BGT7 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smndc1Q8BGT7 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smndc1Q8BGT7 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smndc1Q8BGT7 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smndc1Q8BGT7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smndc1Q8BGT7 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smndc1Q8BGT7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smndc1Q8BGT7 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.48■□□□□ 0.71
Smndc1Q8BGT7 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smndc1Q8BGT7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smndc1Q8BGT7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Smndc1Q8BGT7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smndc1Q8BGT7 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smndc1Q8BGT7 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Smndc1Q8BGT7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smndc1Q8BGT7 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Smndc1Q8BGT7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.47■□□□□ 0.71
Smndc1Q8BGT7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smndc1Q8BGT7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smndc1Q8BGT7 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smndc1Q8BGT7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Smndc1Q8BGT7 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smndc1Q8BGT7 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smndc1Q8BGT7 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.46■□□□□ 0.71
Smndc1Q8BGT7 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smndc1Q8BGT7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smndc1Q8BGT7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smndc1Q8BGT7 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smndc1Q8BGT7 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.46■□□□□ 0.71
Smndc1Q8BGT7 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smndc1Q8BGT7 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.46■□□□□ 0.71
Smndc1Q8BGT7 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smndc1Q8BGT7 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.46■□□□□ 0.71
Smndc1Q8BGT7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smndc1Q8BGT7 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smndc1Q8BGT7 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Smndc1Q8BGT7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smndc1Q8BGT7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smndc1Q8BGT7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smndc1Q8BGT7 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smndc1Q8BGT7 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Smndc1Q8BGT7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smndc1Q8BGT7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smndc1Q8BGT7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.44■□□□□ 0.7
Smndc1Q8BGT7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smndc1Q8BGT7 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smndc1Q8BGT7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smndc1Q8BGT7 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Smndc1Q8BGT7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Smndc1Q8BGT7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smndc1Q8BGT7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smndc1Q8BGT7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smndc1Q8BGT7 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.43■□□□□ 0.7
Smndc1Q8BGT7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Smndc1Q8BGT7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Smndc1Q8BGT7 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smndc1Q8BGT7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
Smndc1Q8BGT7 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smndc1Q8BGT7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Smndc1Q8BGT7 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smndc1Q8BGT7 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smndc1Q8BGT7 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smndc1Q8BGT7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Smndc1Q8BGT7 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smndc1Q8BGT7 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.42■□□□□ 0.7
Smndc1Q8BGT7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smndc1Q8BGT7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smndc1Q8BGT7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smndc1Q8BGT7 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smndc1Q8BGT7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Smndc1Q8BGT7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Smndc1Q8BGT7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms