Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim65Q8BFW4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Trim65Q8BFW4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Trim65Q8BFW4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Trim65Q8BFW4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim65Q8BFW4 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Trim65Q8BFW4 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.82■■□□□ 1.08
Trim65Q8BFW4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim65Q8BFW4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim65Q8BFW4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.81■■□□□ 1.08
Trim65Q8BFW4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim65Q8BFW4 Gm14117-201ENSMUST00000122417 843 ntBASIC21.81■■□□□ 1.08
Trim65Q8BFW4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.81■■□□□ 1.08
Trim65Q8BFW4 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim65Q8BFW4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim65Q8BFW4 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim65Q8BFW4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Trim65Q8BFW4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim65Q8BFW4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
Trim65Q8BFW4 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Trim65Q8BFW4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim65Q8BFW4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Trim65Q8BFW4 Rps24-207ENSMUST00000224568 714 ntBASIC21.8■■□□□ 1.08
Trim65Q8BFW4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim65Q8BFW4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim65Q8BFW4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim65Q8BFW4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Trim65Q8BFW4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim65Q8BFW4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trim65Q8BFW4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Trim65Q8BFW4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim65Q8BFW4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim65Q8BFW4 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.79■■□□□ 1.08
Trim65Q8BFW4 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim65Q8BFW4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Trim65Q8BFW4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Trim65Q8BFW4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim65Q8BFW4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim65Q8BFW4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Trim65Q8BFW4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim65Q8BFW4 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Trim65Q8BFW4 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim65Q8BFW4 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
Trim65Q8BFW4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.77■■□□□ 1.08
Trim65Q8BFW4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim65Q8BFW4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim65Q8BFW4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.77■■□□□ 1.08
Trim65Q8BFW4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Trim65Q8BFW4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.77■■□□□ 1.08
Trim65Q8BFW4 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Trim65Q8BFW4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Trim65Q8BFW4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.76■■□□□ 1.07
Trim65Q8BFW4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Trim65Q8BFW4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim65Q8BFW4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim65Q8BFW4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim65Q8BFW4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim65Q8BFW4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.75■■□□□ 1.07
Trim65Q8BFW4 Gm22238-201ENSMUST00000175222 88 ntBASIC21.75■■□□□ 1.07
Trim65Q8BFW4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
Trim65Q8BFW4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Trim65Q8BFW4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim65Q8BFW4 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.74■■□□□ 1.07
Trim65Q8BFW4 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.74■■□□□ 1.07
Trim65Q8BFW4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.74■■□□□ 1.07
Trim65Q8BFW4 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim65Q8BFW4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Trim65Q8BFW4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim65Q8BFW4 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim65Q8BFW4 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim65Q8BFW4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Trim65Q8BFW4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Trim65Q8BFW4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim65Q8BFW4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Trim65Q8BFW4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Trim65Q8BFW4 Gm9870-201ENSMUST00000063874 645 ntBASIC21.73■■□□□ 1.07
Trim65Q8BFW4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim65Q8BFW4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim65Q8BFW4 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim65Q8BFW4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim65Q8BFW4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim65Q8BFW4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim65Q8BFW4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.72■■□□□ 1.07
Trim65Q8BFW4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trim65Q8BFW4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trim65Q8BFW4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim65Q8BFW4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim65Q8BFW4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim65Q8BFW4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim65Q8BFW4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Trim65Q8BFW4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim65Q8BFW4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Trim65Q8BFW4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.71■■□□□ 1.07
Trim65Q8BFW4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim65Q8BFW4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim65Q8BFW4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim65Q8BFW4 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim65Q8BFW4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim65Q8BFW4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim65Q8BFW4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms