Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim50Q810I2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim50Q810I2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
Trim50Q810I2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim50Q810I2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim50Q810I2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim50Q810I2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim50Q810I2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim50Q810I2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim50Q810I2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim50Q810I2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.78■□□□□ 0.76
Trim50Q810I2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim50Q810I2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim50Q810I2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim50Q810I2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim50Q810I2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim50Q810I2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.77■□□□□ 0.76
Trim50Q810I2 Gm22238-201ENSMUST00000175222 88 ntBASIC19.77■□□□□ 0.76
Trim50Q810I2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.77■□□□□ 0.76
Trim50Q810I2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.77■□□□□ 0.76
Trim50Q810I2 Gm7143-201ENSMUST00000222811 859 ntBASIC19.77■□□□□ 0.76
Trim50Q810I2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim50Q810I2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Trim50Q810I2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trim50Q810I2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Trim50Q810I2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim50Q810I2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim50Q810I2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim50Q810I2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.76■□□□□ 0.75
Trim50Q810I2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Trim50Q810I2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim50Q810I2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim50Q810I2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Trim50Q810I2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim50Q810I2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim50Q810I2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim50Q810I2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim50Q810I2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim50Q810I2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim50Q810I2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim50Q810I2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Trim50Q810I2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim50Q810I2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim50Q810I2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim50Q810I2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim50Q810I2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim50Q810I2 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.74■□□□□ 0.75
Trim50Q810I2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim50Q810I2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim50Q810I2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim50Q810I2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim50Q810I2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim50Q810I2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim50Q810I2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.73■□□□□ 0.75
Trim50Q810I2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.73■□□□□ 0.75
Trim50Q810I2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Trim50Q810I2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.73■□□□□ 0.75
Trim50Q810I2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.73■□□□□ 0.75
Trim50Q810I2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Trim50Q810I2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim50Q810I2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.73■□□□□ 0.75
Trim50Q810I2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim50Q810I2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
Trim50Q810I2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim50Q810I2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim50Q810I2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Trim50Q810I2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim50Q810I2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Trim50Q810I2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.71■□□□□ 0.75
Trim50Q810I2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim50Q810I2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Trim50Q810I2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Trim50Q810I2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim50Q810I2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Trim50Q810I2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.71■□□□□ 0.75
Trim50Q810I2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim50Q810I2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim50Q810I2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Trim50Q810I2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Trim50Q810I2 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim50Q810I2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim50Q810I2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim50Q810I2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim50Q810I2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim50Q810I2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Trim50Q810I2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Trim50Q810I2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.7■□□□□ 0.74
Trim50Q810I2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Trim50Q810I2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim50Q810I2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim50Q810I2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim50Q810I2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim50Q810I2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.69■□□□□ 0.74
Trim50Q810I2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.69■□□□□ 0.74
Trim50Q810I2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.69■□□□□ 0.74
Trim50Q810I2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim50Q810I2 Gm9870-201ENSMUST00000063874 645 ntBASIC19.69■□□□□ 0.74
Trim50Q810I2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim50Q810I2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Trim50Q810I2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms