Protein–RNA interactions for Protein: Q80Z38

Shank2, SH3 and multiple ankyrin repeat domains protein 2, mousemouse

Predictions only

Length 1,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank2Q80Z38 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Shank2Q80Z38 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Shank2Q80Z38 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Shank2Q80Z38 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
Shank2Q80Z38 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC26.81■■□□□ 1.88
Shank2Q80Z38 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Shank2Q80Z38 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Shank2Q80Z38 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Shank2Q80Z38 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Shank2Q80Z38 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC26.81■■□□□ 1.88
Shank2Q80Z38 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
Shank2Q80Z38 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC26.81■■□□□ 1.88
Shank2Q80Z38 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Shank2Q80Z38 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Shank2Q80Z38 Gm12441-201ENSMUST00000121806 588 ntBASIC26.81■■□□□ 1.88
Shank2Q80Z38 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
Shank2Q80Z38 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Shank2Q80Z38 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC26.8■■□□□ 1.88
Shank2Q80Z38 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
Shank2Q80Z38 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Shank2Q80Z38 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Shank2Q80Z38 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Shank2Q80Z38 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Shank2Q80Z38 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC26.79■■□□□ 1.88
Shank2Q80Z38 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC26.79■■□□□ 1.88
Shank2Q80Z38 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Shank2Q80Z38 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Shank2Q80Z38 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Shank2Q80Z38 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Shank2Q80Z38 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Shank2Q80Z38 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
Shank2Q80Z38 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC26.78■■□□□ 1.88
Shank2Q80Z38 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Shank2Q80Z38 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Shank2Q80Z38 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
Shank2Q80Z38 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Shank2Q80Z38 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Shank2Q80Z38 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Shank2Q80Z38 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Shank2Q80Z38 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Shank2Q80Z38 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Shank2Q80Z38 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
Shank2Q80Z38 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Shank2Q80Z38 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC26.76■■□□□ 1.87
Shank2Q80Z38 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Shank2Q80Z38 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Shank2Q80Z38 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Shank2Q80Z38 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Shank2Q80Z38 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC26.75■■□□□ 1.87
Shank2Q80Z38 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Shank2Q80Z38 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
Shank2Q80Z38 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Shank2Q80Z38 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Shank2Q80Z38 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC26.74■■□□□ 1.87
Shank2Q80Z38 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Shank2Q80Z38 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Shank2Q80Z38 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Shank2Q80Z38 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC26.74■■□□□ 1.87
Shank2Q80Z38 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC26.74■■□□□ 1.87
Shank2Q80Z38 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Shank2Q80Z38 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Shank2Q80Z38 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
Shank2Q80Z38 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Shank2Q80Z38 Gm27045-201ENSMUST00000182145 1402 ntBASIC26.73■■□□□ 1.87
Shank2Q80Z38 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC26.73■■□□□ 1.87
Shank2Q80Z38 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Shank2Q80Z38 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Shank2Q80Z38 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Shank2Q80Z38 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
Shank2Q80Z38 Gm10252-201ENSMUST00000209541 832 ntBASIC26.72■■□□□ 1.87
Shank2Q80Z38 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Shank2Q80Z38 Gm14281-201ENSMUST00000121700 1294 ntBASIC26.71■■□□□ 1.87
Shank2Q80Z38 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Shank2Q80Z38 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC26.71■■□□□ 1.87
Shank2Q80Z38 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC26.71■■□□□ 1.87
Shank2Q80Z38 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC26.71■■□□□ 1.87
Shank2Q80Z38 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC26.71■■□□□ 1.87
Shank2Q80Z38 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Shank2Q80Z38 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Shank2Q80Z38 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
Shank2Q80Z38 Gm13234-201ENSMUST00000120010 747 ntBASIC26.69■■□□□ 1.86
Shank2Q80Z38 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC26.69■■□□□ 1.86
Shank2Q80Z38 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC26.69■■□□□ 1.86
Shank2Q80Z38 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Shank2Q80Z38 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Shank2Q80Z38 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Shank2Q80Z38 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Shank2Q80Z38 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
Shank2Q80Z38 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Shank2Q80Z38 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC26.68■■□□□ 1.86
Shank2Q80Z38 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC26.68■■□□□ 1.86
Shank2Q80Z38 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Shank2Q80Z38 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC26.67■■□□□ 1.86
Shank2Q80Z38 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Shank2Q80Z38 Ap3s1-204ENSMUST00000225520 957 ntBASIC26.67■■□□□ 1.86
Shank2Q80Z38 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Shank2Q80Z38 Gm4968-201ENSMUST00000071458 858 ntBASIC26.67■■□□□ 1.86
Shank2Q80Z38 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Shank2Q80Z38 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Shank2Q80Z38 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms