Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ttc28Q80XJ3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ttc28Q80XJ3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ttc28Q80XJ3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ttc28Q80XJ3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.3■□□□□ 0.36
Ttc28Q80XJ3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ttc28Q80XJ3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ttc28Q80XJ3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Ttc28Q80XJ3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ttc28Q80XJ3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Ttc28Q80XJ3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
Ttc28Q80XJ3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ttc28Q80XJ3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ttc28Q80XJ3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ttc28Q80XJ3 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ttc28Q80XJ3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ttc28Q80XJ3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ttc28Q80XJ3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
Ttc28Q80XJ3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ttc28Q80XJ3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.29■□□□□ 0.36
Ttc28Q80XJ3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.29■□□□□ 0.36
Ttc28Q80XJ3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ttc28Q80XJ3 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ttc28Q80XJ3 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.28■□□□□ 0.36
Ttc28Q80XJ3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc28Q80XJ3 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc28Q80XJ3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc28Q80XJ3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc28Q80XJ3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc28Q80XJ3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc28Q80XJ3 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ttc28Q80XJ3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc28Q80XJ3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Ttc28Q80XJ3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.27■□□□□ 0.36
Ttc28Q80XJ3 Gm10602-201ENSMUST00000098239 609 ntBASIC17.27■□□□□ 0.36
Ttc28Q80XJ3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ttc28Q80XJ3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ttc28Q80XJ3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ttc28Q80XJ3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Ttc28Q80XJ3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Ttc28Q80XJ3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ttc28Q80XJ3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ttc28Q80XJ3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ttc28Q80XJ3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ttc28Q80XJ3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Ttc28Q80XJ3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ttc28Q80XJ3 Gm11421-201ENSMUST00000122124 294 ntBASIC17.26■□□□□ 0.35
Ttc28Q80XJ3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ttc28Q80XJ3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ttc28Q80XJ3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ttc28Q80XJ3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ttc28Q80XJ3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ttc28Q80XJ3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ttc28Q80XJ3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ttc28Q80XJ3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ttc28Q80XJ3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ttc28Q80XJ3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ttc28Q80XJ3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ttc28Q80XJ3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.25■□□□□ 0.35
Ttc28Q80XJ3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ttc28Q80XJ3 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.25■□□□□ 0.35
Ttc28Q80XJ3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.25■□□□□ 0.35
Ttc28Q80XJ3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ttc28Q80XJ3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ttc28Q80XJ3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.24■□□□□ 0.35
Ttc28Q80XJ3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ttc28Q80XJ3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ttc28Q80XJ3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ttc28Q80XJ3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ttc28Q80XJ3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ttc28Q80XJ3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ttc28Q80XJ3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Ttc28Q80XJ3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ttc28Q80XJ3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ttc28Q80XJ3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.23■□□□□ 0.35
Ttc28Q80XJ3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ttc28Q80XJ3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ttc28Q80XJ3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ttc28Q80XJ3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.23■□□□□ 0.35
Ttc28Q80XJ3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.22■□□□□ 0.35
Ttc28Q80XJ3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ttc28Q80XJ3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ttc28Q80XJ3 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.22■□□□□ 0.35
Ttc28Q80XJ3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ttc28Q80XJ3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ttc28Q80XJ3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ttc28Q80XJ3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ttc28Q80XJ3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ttc28Q80XJ3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ttc28Q80XJ3 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ttc28Q80XJ3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ttc28Q80XJ3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ttc28Q80XJ3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ttc28Q80XJ3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ttc28Q80XJ3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ttc28Q80XJ3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.21■□□□□ 0.35
Ttc28Q80XJ3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ttc28Q80XJ3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ttc28Q80XJ3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ttc28Q80XJ3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms