Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
Lrrtm4Q80XG9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrtm4Q80XG9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrtm4Q80XG9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lrrtm4Q80XG9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lrrtm4Q80XG9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Lrrtm4Q80XG9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lrrtm4Q80XG9 Gm12821-201ENSMUST00000120022 600 ntBASIC19.83■□□□□ 0.77
Lrrtm4Q80XG9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.83■□□□□ 0.77
Lrrtm4Q80XG9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.83■□□□□ 0.77
Lrrtm4Q80XG9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lrrtm4Q80XG9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Lrrtm4Q80XG9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lrrtm4Q80XG9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lrrtm4Q80XG9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
Lrrtm4Q80XG9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lrrtm4Q80XG9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lrrtm4Q80XG9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lrrtm4Q80XG9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Lrrtm4Q80XG9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lrrtm4Q80XG9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lrrtm4Q80XG9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lrrtm4Q80XG9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.82■□□□□ 0.76
Lrrtm4Q80XG9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.82■□□□□ 0.76
Lrrtm4Q80XG9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Lrrtm4Q80XG9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lrrtm4Q80XG9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lrrtm4Q80XG9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.81■□□□□ 0.76
Lrrtm4Q80XG9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lrrtm4Q80XG9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lrrtm4Q80XG9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lrrtm4Q80XG9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.81■□□□□ 0.76
Lrrtm4Q80XG9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Lrrtm4Q80XG9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lrrtm4Q80XG9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
Lrrtm4Q80XG9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lrrtm4Q80XG9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Lrrtm4Q80XG9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
Lrrtm4Q80XG9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lrrtm4Q80XG9 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.8■□□□□ 0.76
Lrrtm4Q80XG9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lrrtm4Q80XG9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Lrrtm4Q80XG9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Lrrtm4Q80XG9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Lrrtm4Q80XG9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lrrtm4Q80XG9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lrrtm4Q80XG9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lrrtm4Q80XG9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lrrtm4Q80XG9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Lrrtm4Q80XG9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Lrrtm4Q80XG9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Lrrtm4Q80XG9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lrrtm4Q80XG9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lrrtm4Q80XG9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.79■□□□□ 0.76
Lrrtm4Q80XG9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lrrtm4Q80XG9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lrrtm4Q80XG9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lrrtm4Q80XG9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lrrtm4Q80XG9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lrrtm4Q80XG9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lrrtm4Q80XG9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lrrtm4Q80XG9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Lrrtm4Q80XG9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lrrtm4Q80XG9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lrrtm4Q80XG9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Lrrtm4Q80XG9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lrrtm4Q80XG9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.77■□□□□ 0.76
Lrrtm4Q80XG9 Gm27454-201ENSMUST00000185090 204 ntBASIC19.77■□□□□ 0.76
Lrrtm4Q80XG9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.77■□□□□ 0.76
Lrrtm4Q80XG9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
Lrrtm4Q80XG9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Lrrtm4Q80XG9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Lrrtm4Q80XG9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lrrtm4Q80XG9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lrrtm4Q80XG9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Lrrtm4Q80XG9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lrrtm4Q80XG9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Lrrtm4Q80XG9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Lrrtm4Q80XG9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.76■□□□□ 0.75
Lrrtm4Q80XG9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.76■□□□□ 0.75
Lrrtm4Q80XG9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lrrtm4Q80XG9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Lrrtm4Q80XG9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lrrtm4Q80XG9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lrrtm4Q80XG9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lrrtm4Q80XG9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lrrtm4Q80XG9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lrrtm4Q80XG9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lrrtm4Q80XG9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Lrrtm4Q80XG9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lrrtm4Q80XG9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Lrrtm4Q80XG9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lrrtm4Q80XG9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lrrtm4Q80XG9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lrrtm4Q80XG9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lrrtm4Q80XG9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lrrtm4Q80XG9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Lrrtm4Q80XG9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Lrrtm4Q80XG9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lrrtm4Q80XG9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms