Protein–RNA interactions for Protein: Q80XC6

Nrde2, Protein NRDE2 homolog, mousemouse

Predictions only

Length 1,172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrde2Q80XC6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Nrde2Q80XC6 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nrde2Q80XC6 Gm29257-201ENSMUST00000186115 639 ntBASIC20.57■□□□□ 0.88
Nrde2Q80XC6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nrde2Q80XC6 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Nrde2Q80XC6 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nrde2Q80XC6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Nrde2Q80XC6 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nrde2Q80XC6 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.56■□□□□ 0.88
Nrde2Q80XC6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nrde2Q80XC6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nrde2Q80XC6 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nrde2Q80XC6 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nrde2Q80XC6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Nrde2Q80XC6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nrde2Q80XC6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Nrde2Q80XC6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.55■□□□□ 0.88
Nrde2Q80XC6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nrde2Q80XC6 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nrde2Q80XC6 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nrde2Q80XC6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.55■□□□□ 0.88
Nrde2Q80XC6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nrde2Q80XC6 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nrde2Q80XC6 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nrde2Q80XC6 Gm7143-201ENSMUST00000222811 859 ntBASIC20.55■□□□□ 0.88
Nrde2Q80XC6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Nrde2Q80XC6 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nrde2Q80XC6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Nrde2Q80XC6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nrde2Q80XC6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nrde2Q80XC6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Nrde2Q80XC6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nrde2Q80XC6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nrde2Q80XC6 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nrde2Q80XC6 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nrde2Q80XC6 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Nrde2Q80XC6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nrde2Q80XC6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.53■□□□□ 0.88
Nrde2Q80XC6 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Nrde2Q80XC6 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nrde2Q80XC6 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Nrde2Q80XC6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Nrde2Q80XC6 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Nrde2Q80XC6 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nrde2Q80XC6 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nrde2Q80XC6 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nrde2Q80XC6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nrde2Q80XC6 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nrde2Q80XC6 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Nrde2Q80XC6 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nrde2Q80XC6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nrde2Q80XC6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
Nrde2Q80XC6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nrde2Q80XC6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nrde2Q80XC6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.51■□□□□ 0.87
Nrde2Q80XC6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nrde2Q80XC6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Nrde2Q80XC6 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.51■□□□□ 0.87
Nrde2Q80XC6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Nrde2Q80XC6 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.51■□□□□ 0.87
Nrde2Q80XC6 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nrde2Q80XC6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nrde2Q80XC6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nrde2Q80XC6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nrde2Q80XC6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.5■□□□□ 0.87
Nrde2Q80XC6 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nrde2Q80XC6 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nrde2Q80XC6 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nrde2Q80XC6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nrde2Q80XC6 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.5■□□□□ 0.87
Nrde2Q80XC6 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nrde2Q80XC6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nrde2Q80XC6 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nrde2Q80XC6 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nrde2Q80XC6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nrde2Q80XC6 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.49■□□□□ 0.87
Nrde2Q80XC6 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nrde2Q80XC6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nrde2Q80XC6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nrde2Q80XC6 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nrde2Q80XC6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Nrde2Q80XC6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nrde2Q80XC6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nrde2Q80XC6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nrde2Q80XC6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nrde2Q80XC6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nrde2Q80XC6 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nrde2Q80XC6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Nrde2Q80XC6 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.48■□□□□ 0.87
Nrde2Q80XC6 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Nrde2Q80XC6 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nrde2Q80XC6 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nrde2Q80XC6 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nrde2Q80XC6 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nrde2Q80XC6 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Nrde2Q80XC6 Gm43173-201ENSMUST00000202246 593 ntBASIC20.47■□□□□ 0.87
Nrde2Q80XC6 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nrde2Q80XC6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nrde2Q80XC6 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Nrde2Q80XC6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms